Gene annotation
Transcriptome id Sobic.009G017600.1
Synonym Sb09g001680
Functional annotation cupin domain containing protein, expressed
UniProt C5YYX1
Pfam PF00190
Panther DB PTHR31189 PTHR31189:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28680 : RmlC-like cupins superfamily protein
RAP-DB (Rice) LOC_Os05g02520.1 : cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a024834 , Zm00025a053214 , Zm00025a038239 , Zm00025a040845
Brachypodium KQK11820 , KQK07756
Barley HORVU7Hr1G119320.1 , HORVU7Hr1G119320.4 , HORVU3Hr1G116010.2 , HORVU5Hr1G061010.6 , HORVU3Hr1G114900.1 , HORVU1Hr1G008130.2 , HORVU1Hr1G008130.1 , HORVU5Hr1G061010.8 , HORVU5Hr1G061010.5 , HORVU5Hr1G061010.4 , HORVU5Hr1G061010.7 , HORVU7Hr1G119190.1 , HORVU5Hr1G061010.1 , HORVU5Hr1G061010.3 , HORVU5Hr1G061010.2
Wheat TraesCS3A02G526500 , TraesCS7A02G545600 , TraesCS3B02G601300 , TraesCS1B02G059000 , TraesCS3D02G536500 , TraesCS7B02G468800 , TraesCS1A02G045800 , TraesCS1D02G046400 , TraesCS1A02G369500 , TraesCS3D02G531600 , TraesCS3A02G531100 , TraesCS3A02G531000 , TraesCS1D02G375400 , TraesCS7D02G531900 , TraesCS7A02G545400 , TraesCS3B02G593800 , TraesCS3B02G601500
Populus -


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cDNA sequences
Sobic.009G017600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G103600 gp176, putative, expressed -
2 Sobic.001G015000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nuclear antigen, putative, expressed -
3 Sobic.004G002700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
4 Sobic.008G095500 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
5 Sobic.004G003300 integral membrane protein DUF6 containing protein, expressed -
6 Sobic.001G518900 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.009G149100 GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
8 Sobic.004G217100 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.002G097200 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
10 Sobic.001G021200 elongation factor, putative, expressed -
11 Sobic.004G335400 expressed protein -
12 Sobic.005G058000 expressed protein -
13 Sobic.002G096600 OsFBX15 - F-box domain containing protein, expressed -
14 Sobic.010G202400 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.009G240500 lipase class 3 family protein, putative, expressed -
16 Sobic.002G298600 LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
17 Sobic.005G041500 OsProCP5 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
18 Sobic.002G019300 OsFBL33 - F-box domain and LRR containing protein, expressed -
19 Sobic.001G364300 - -
20 Sobic.008G088500 amino acid transporter, putative, expressed -


Gene co-expression network
sample Sobic009G017600 Sobic009G017600 Sobic001G103600 Sobic001G103600 Sobic009G017600--Sobic001G103600 Sobic001G015000 Sobic001G015000 Sobic009G017600--Sobic001G015000 Sobic004G002700 Sobic004G002700 Sobic009G017600--Sobic004G002700 Sobic008G095500 Sobic008G095500 Sobic009G017600--Sobic008G095500 Sobic004G003300 Sobic004G003300 Sobic009G017600--Sobic004G003300 Sobic001G518900 Sobic001G518900 Sobic009G017600--Sobic001G518900 Sobic009G149100 Sobic009G149100 Sobic009G017600--Sobic009G149100 Sobic004G217100 Sobic004G217100 Sobic009G017600--Sobic004G217100 Sobic002G097200 Sobic002G097200 Sobic009G017600--Sobic002G097200 Sobic001G103600--Sobic009G149100 Sobic004G335400 Sobic004G335400 Sobic001G103600--Sobic004G335400 Sobic005G041500 Sobic005G041500 Sobic001G103600--Sobic005G041500 Sobic002G298600 Sobic002G298600 Sobic001G103600--Sobic002G298600 Sobic002G019300 Sobic002G019300 Sobic001G103600--Sobic002G019300 Sobic006G276600 Sobic006G276600 Sobic001G103600--Sobic006G276600 Sobic001G103600--Sobic004G002700 Sobic001G021200 Sobic001G021200 Sobic001G103600--Sobic001G021200 Sobic001G103600--Sobic008G095500 Sobic004G254700 Sobic004G254700 Sobic001G015000--Sobic004G254700 Sobic001G015000--Sobic001G103600 Sobic001G015000--Sobic002G019300 Sobic001G015000--Sobic009G149100 Sobic001G015000--Sobic006G276600 Sobic001G015000--Sobic004G335400 Sobic008G071700 Sobic008G071700 Sobic001G015000--Sobic008G071700 Sobic001G015000--Sobic005G041500 Sobic001G015000--Sobic002G298600 Sobic004G002700--Sobic004G003300 Sobic010G202400 Sobic010G202400 Sobic004G002700--Sobic010G202400 Sobic004G002700--Sobic001G021200 Sobic001G241700 Sobic001G241700 Sobic004G002700--Sobic001G241700 Sobic005G058000 Sobic005G058000 Sobic004G002700--Sobic005G058000 Sobic002G096600 Sobic002G096600 Sobic004G002700--Sobic002G096600 Sobic004G002700--Sobic008G095500 Sobic008G088500 Sobic008G088500 Sobic004G002700--Sobic008G088500 Sobic004G002700--Sobic009G149100 Sobic008G095500--Sobic008G088500 Sobic008G168500 Sobic008G168500 Sobic008G095500--Sobic008G168500 Sobic008G095500--Sobic002G096600 Sobic008G095500--Sobic005G058000 Sobic001G364300 Sobic001G364300 Sobic008G095500--Sobic001G364300 Sobic005G058200 Sobic005G058200 Sobic008G095500--Sobic005G058200 Sobic008G095500--Sobic001G021200 Sobic005G007200 Sobic005G007200 Sobic008G095500--Sobic005G007200 Sobic008G177001 Sobic008G177001 Sobic008G095500--Sobic008G177001 Sobic004G003300--Sobic001G021200 Sobic004G003300--Sobic004G002700 Sobic003G428500 Sobic003G428500 Sobic004G003300--Sobic003G428500 Sobic004G003300--Sobic010G202400 Sobic004G003300--Sobic008G088500 Sobic004G003300--Sobic008G168500 Sobic004G003300--Sobic005G058000 Sobic004G003300--Sobic002G096600 Sobic004G003300--Sobic008G095500 Sobic001G518900--Sobic008G095500 Sobic001G518900--Sobic008G088500 Sobic001G518900--Sobic008G168500 Sobic009G047900 Sobic009G047900 Sobic001G518900--Sobic009G047900 Sobic001G518900--Sobic002G096600 Sobic001G518900--Sobic005G058000 Sobic010G196700 Sobic010G196700 Sobic001G518900--Sobic010G196700 Sobic001G518900--Sobic001G364300 Sobic001G518900--Sobic005G058200 Sobic009G149100--Sobic006G276600 Sobic009G149100--Sobic002G019300 Sobic009G149100--Sobic004G335400 Sobic009G149100--Sobic005G041500 Sobic009G149100--Sobic004G254700 Sobic009G149100--Sobic002G298600 Sobic009G149100--Sobic001G241700 Sobic009G149100--Sobic008G071700 Sobic009G149100--Sobic001G103600 Sobic006G224400 Sobic006G224400 Sobic004G217100--Sobic006G224400 Sobic005G087732 Sobic005G087732 Sobic004G217100--Sobic005G087732 Sobic007G167950 Sobic007G167950 Sobic004G217100--Sobic007G167950 Sobic004G086900 Sobic004G086900 Sobic004G217100--Sobic004G086900 Sobic007G110800 Sobic007G110800 Sobic004G217100--Sobic007G110800 Sobic007G082300 Sobic007G082300 Sobic004G217100--Sobic007G082300 Sobic005G058300 Sobic005G058300 Sobic004G217100--Sobic005G058300 Sobic007G081800 Sobic007G081800 Sobic004G217100--Sobic007G081800 Sobic010G123800 Sobic010G123800 Sobic004G217100--Sobic010G123800 Sobic002G060101 Sobic002G060101 Sobic002G097200--Sobic002G060101 Sobic005G037600 Sobic005G037600 Sobic002G097200--Sobic005G037600 Sobic006G199500 Sobic006G199500 Sobic002G097200--Sobic006G199500 Sobic009G048700 Sobic009G048700 Sobic002G097200--Sobic009G048700 Sobic001G504800 Sobic001G504800 Sobic002G097200--Sobic001G504800 Sobic010G038300 Sobic010G038300 Sobic002G097200--Sobic010G038300 Sobic004G168900 Sobic004G168900 Sobic002G097200--Sobic004G168900 Sobic009G145000 Sobic009G145000 Sobic002G097200--Sobic009G145000 Sobic003G005700 Sobic003G005700 Sobic002G097200--Sobic003G005700
Octagon: transcription factors


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