Gene annotation
Transcriptome id Sobic.010G192200.1
Synonym Sb10g024180, ARR10, RR10
Functional annotation two-component response regulator, putative, expressed
UniProt A0A194YK59
Pfam PF00072
Panther DB PTHR26402 PTHR26402:SF529
NCBI CDD KOG1601; GATA-4/5/6 transcription factors
KEGG Orthology K14491; two-component response regulator ARR-B family
Gene Ontology GO:0000160; phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT4G31920 : response regulator 10
RAP-DB (Rice) LOC_Os06g43910.1 : two-component response regulator, putative, expressed
MaizeGDB (Corn) Zm00025a042121 , Zm00025a019247 , Zm00025a051552
Brachypodium -
Barley HORVU7Hr1G112830.1 , HORVU7Hr1G112830.2 , HORVU7Hr1G114450.1 , HORVU7Hr1G114450.2 , HORVU7Hr1G112950.5 , HORVU7Hr1G112950.4 , HORVU7Hr1G112950.3 , HORVU7Hr1G030050.4 , HORVU7Hr1G030050.6 , HORVU7Hr1G030050.1 , HORVU7Hr1G030050.3 , HORVU7Hr1G030050.2 , HORVU7Hr1G030000.2 , HORVU7Hr1G030000.3 , HORVU7Hr1G030000.1 , HORVU7Hr1G030000.6 , HORVU7Hr1G030000.7 , HORVU7Hr1G030000.4 , HORVU7Hr1G030000.5 , HORVU7Hr1G030000.8 , HORVU7Hr1G030000.9 , HORVU7Hr1G030000.12 , HORVU7Hr1G030000.13 , HORVU7Hr1G030000.15
Wheat TraesCS3A02G473800 , TraesCS7B02G422100 , TraesCS7B02G421000 , TraesCS7A02G511300 , TraesCS7B02G408600 , TraesCS7D02G489600 , TraesCS7B02G049200 , TraesCS7D02G500600 , TraesCS3B02G517000 , TraesCS7B02G422000 , TraesCS7D02G148000 , TraesCS7A02G511100 , TraesCS7A02G146400 , TraesCS7A02G502300 , TraesCS7A02G146500 , TraesCS7D02G499700 , TraesCSU02G040900 , TraesCS3A02G473600 , TraesCS7B02G049000 , TraesCS7A02G146700 , TraesCS7B02G408700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G055901 - -
2 Sobic.002G057700 - -
3 Sobic.003G165401 - -
4 Sobic.008G140500 expressed protein -
5 Sobic.003G137000 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.010G133275 - -
7 Sobic.005G179900 OsMADS89 - MADS-box family gene with M-gamma type-box, expressed -
8 Sobic.002G124832 - -
9 Sobic.002G344800 - -
10 Sobic.002G069300 DNA binding protein, putative, expressed -
11 Sobic.002G014100 OsFBX212 - F-box domain containing protein, expressed -
12 Sobic.010G143666 - -
13 Sobic.006G142925 - -
14 Sobic.003G155700 transcription initiation factor IID, 18kD subunit family protein, expressed K03127: transcription initiation factor TFIID subunit 13
15 Sobic.003G281000 - -
16 Sobic.002G202050 - -
17 Sobic.002G202050 - -
18 Sobic.002G202050 - -
19 Sobic.002G202050 - -
20 Sobic.006G247200 AMP-binding enzyme, putative, expressed -


Gene co-expression network
sample Sobic010G192200 Sobic010G192200 Sobic004G055901 Sobic004G055901 Sobic010G192200--Sobic004G055901 Sobic002G057700 Sobic002G057700 Sobic010G192200--Sobic002G057700 Sobic003G165401 Sobic003G165401 Sobic010G192200--Sobic003G165401 Sobic008G140500 Sobic008G140500 Sobic010G192200--Sobic008G140500 Sobic003G137000 Sobic003G137000 Sobic010G192200--Sobic003G137000 Sobic010G133275 Sobic010G133275 Sobic010G192200--Sobic010G133275 Sobic005G179900 Sobic005G179900 Sobic010G192200--Sobic005G179900 Sobic002G124832 Sobic002G124832 Sobic010G192200--Sobic002G124832 Sobic002G344800 Sobic002G344800 Sobic010G192200--Sobic002G344800 Sobic004G055901--Sobic010G192200 Sobic004G055901--Sobic002G057700 Sobic004G055901--Sobic008G140500 Sobic004G055901--Sobic003G165401 Sobic004G055901--Sobic003G137000 Sobic004G055901--Sobic002G124832 Sobic004G055901--Sobic010G133275 Sobic002G069300 Sobic002G069300 Sobic004G055901--Sobic002G069300 Sobic004G055901--Sobic005G179900 Sobic002G057700--Sobic005G179900 Sobic002G057700--Sobic010G192200 Sobic002G057700--Sobic004G055901 Sobic002G057700--Sobic010G133275 Sobic002G057700--Sobic003G165401 Sobic002G057700--Sobic008G140500 Sobic002G057700--Sobic003G137000 Sobic002G057700--Sobic002G344800 Sobic003G137500 Sobic003G137500 Sobic002G057700--Sobic003G137500 Sobic003G165401--Sobic003G137000 Sobic003G165401--Sobic008G140500 Sobic003G165401--Sobic002G069300 Sobic003G165401--Sobic002G124832 Sobic006G142925 Sobic006G142925 Sobic003G165401--Sobic006G142925 Sobic002G014100 Sobic002G014100 Sobic003G165401--Sobic002G014100 Sobic010G143666 Sobic010G143666 Sobic003G165401--Sobic010G143666 Sobic003G165401--Sobic010G192200 Sobic003G281000 Sobic003G281000 Sobic003G165401--Sobic003G281000 Sobic008G140500--Sobic003G165401 Sobic008G140500--Sobic003G137000 Sobic004G020150 Sobic004G020150 Sobic008G140500--Sobic004G020150 Sobic008G140500--Sobic006G142925 Sobic008G140500--Sobic004G055901 Sobic008G140500--Sobic002G124832 Sobic008G140500--Sobic010G192200 Sobic009G239400 Sobic009G239400 Sobic008G140500--Sobic009G239400 Sobic008G140500--Sobic002G069300 Sobic003G137000--Sobic003G165401 Sobic003G137000--Sobic002G124832 Sobic003G137000--Sobic002G069300 Sobic003G137000--Sobic002G014100 Sobic003G137000--Sobic010G143666 Sobic003G137000--Sobic003G281000 Sobic003G137000--Sobic006G142925 Sobic003G137000--Sobic008G140500 Sobic003G137000--Sobic002G344800 Sobic010G133275--Sobic002G344800 Sobic002G202050 Sobic002G202050 Sobic010G133275--Sobic002G202050 Sobic006G247200 Sobic006G247200 Sobic010G133275--Sobic006G247200 Sobic010G133275--Sobic010G143666 Sobic010G133275--Sobic002G014100 Sobic002G382200 Sobic002G382200 Sobic010G133275--Sobic002G382200 Sobic005G179900--Sobic002G057700 Sobic005G179900--Sobic010G192200 Sobic005G179900--Sobic010G133275 Sobic005G179900--Sobic004G055901 Sobic005G179900--Sobic003G137500 Sobic005G179900--Sobic002G344800 Sobic001G310000 Sobic001G310000 Sobic005G179900--Sobic001G310000 Sobic004G221800 Sobic004G221800 Sobic005G179900--Sobic004G221800 Sobic008G069100 Sobic008G069100 Sobic005G179900--Sobic008G069100 Sobic002G124832--Sobic003G137000 Sobic002G124832--Sobic003G165401 Sobic002G124832--Sobic002G069300 Sobic002G124832--Sobic002G014100 Sobic002G124832--Sobic006G142925 Sobic002G124832--Sobic010G143666 Sobic002G124832--Sobic003G281000 Sobic002G124832--Sobic008G140500 Sobic002G124832--Sobic002G202050 Sobic002G344800--Sobic002G202050 Sobic002G344800--Sobic006G247200 Sobic002G344800--Sobic002G014100 Sobic002G344800--Sobic010G143666 Sobic002G344800--Sobic002G382200 Sobic004G178550 Sobic004G178550 Sobic002G344800--Sobic004G178550
Octagon: transcription factors


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