Gene annotation
Transcriptome id Sobic.010G236700.2,Sobic.010G236700.3
Synonym Sb10g027830
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1W0VUH1 , A0A1W0VUI7
Pfam PF00069 PF07714
Panther DB PTHR24056 PTHR24056:SF221
NCBI CDD KOG0663; Protein kinase PITSLRE and related kinases KOG0659Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 KOG0600Cdc2-related protein kinase
KEGG Orthology K08819; cyclin-dependent kinase 12/13
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G53050 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os07g47180.1,LOC_Os02g20140.1 : protein kinase domain containing protein, expressed,transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a018187 , Zm00025a052383 , Zm00025a026210 , Zm00025a020703
Brachypodium KQJ99916 , KQK14763 , KQK14762 , KQK21688 , KQK21687
Barley HORVU6Hr1G046160.15 , HORVU6Hr1G046160.14 , HORVU6Hr1G046160.17 , HORVU6Hr1G046160.16 , HORVU6Hr1G046160.11 , HORVU6Hr1G046160.10 , HORVU6Hr1G046160.13 , HORVU6Hr1G046160.12 , HORVU6Hr1G046160.19 , HORVU6Hr1G046160.18 , HORVU6Hr1G046160.1 , HORVU6Hr1G046160.3 , HORVU6Hr1G046160.2 , HORVU6Hr1G046160.5 , HORVU6Hr1G046160.4 , HORVU6Hr1G046160.7 , HORVU6Hr1G046160.6 , HORVU6Hr1G046160.9 , HORVU6Hr1G046160.8 , HORVU7Hr1G101210.1 , HORVU7Hr1G101210.2 , HORVU7Hr1G101210.3 , HORVU6Hr1G046160.20 , HORVU6Hr1G046160.21
Wheat TraesCS5A02G075200 , TraesCS6D02G184000 , TraesCS6D02G184000 , TraesCS5B02G081500 , TraesCS5D02G088700 , TraesCS5D02G088700 , TraesCS7D02G435700 , TraesCS2A02G119300 , TraesCS6A02G192900 , TraesCS6A02G192900 , TraesCS2D02G120200 , TraesCS6B02G231200 , TraesCS6B02G231200 , TraesCS6B02G231200 , TraesCS3A02G439200 , TraesCS7B02G345800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G198100 - -
2 Sobic.006G166300 WRKY36, expressed -
3 Sobic.001G293600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@protein binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
4 Sobic.010G088950 - -
5 Sobic.006G182800 heat stress transcription factor B-1, putative, expressed K09419: heat shock transcription factor, other eukaryote
6 Sobic.001G159850 - -
7 Sobic.001G159850 - -
8 Sobic.001G159850 - -
9 Sobic.001G159850 - -
10 Sobic.001G159850 - -
11 Sobic.001G159850 - -
12 Sobic.001G159850 - -
13 Sobic.001G159850 - -
14 Sobic.001G159850 - -
15 Sobic.001G159850 - -
16 Sobic.001G159850 - -
17 Sobic.001G159850 - -
18 Sobic.001G159850 - -
19 Sobic.001G159850 - -
20 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic010G236700 Sobic010G236700 Sobic003G198100 Sobic003G198100 Sobic010G236700--Sobic003G198100 Sobic006G166300 Sobic006G166300 Sobic010G236700--Sobic006G166300 Sobic001G293600 Sobic001G293600 Sobic010G236700--Sobic001G293600 Sobic010G088950 Sobic010G088950 Sobic010G236700--Sobic010G088950 Sobic006G182800 Sobic006G182800 Sobic010G236700--Sobic006G182800 Sobic001G159850 Sobic001G159850 Sobic010G236700--Sobic001G159850 Sobic003G198100--Sobic006G166300 Sobic003G198100--Sobic010G236700 Sobic003G233100 Sobic003G233100 Sobic003G198100--Sobic003G233100 Sobic003G198100--Sobic001G293600 Sobic002G210100 Sobic002G210100 Sobic003G198100--Sobic002G210100 Sobic001G396300 Sobic001G396300 Sobic003G198100--Sobic001G396300 Sobic006G228400 Sobic006G228400 Sobic003G198100--Sobic006G228400 Sobic001G252800 Sobic001G252800 Sobic003G198100--Sobic001G252800 Sobic003G198100--Sobic010G088950 Sobic003G423100 Sobic003G423100 Sobic006G166300--Sobic003G423100 Sobic003G178200 Sobic003G178200 Sobic006G166300--Sobic003G178200 Sobic003G245700 Sobic003G245700 Sobic006G166300--Sobic003G245700 Sobic007G072901 Sobic007G072901 Sobic006G166300--Sobic007G072901 Sobic002G037000 Sobic002G037000 Sobic006G166300--Sobic002G037000 Sobic005G037500 Sobic005G037500 Sobic006G166300--Sobic005G037500 Sobic007G210400 Sobic007G210400 Sobic006G166300--Sobic007G210400 Sobic006G090201 Sobic006G090201 Sobic006G166300--Sobic006G090201 Sobic005G189400 Sobic005G189400 Sobic006G166300--Sobic005G189400 Sobic001G293600--Sobic010G088950 Sobic001G293600--Sobic003G198100 Sobic001G293600--Sobic010G236700 Sobic002G271100 Sobic002G271100 Sobic001G293600--Sobic002G271100 Sobic001G293600--Sobic006G166300 Sobic010G220400 Sobic010G220400 Sobic001G293600--Sobic010G220400 Sobic009G000700 Sobic009G000700 Sobic001G293600--Sobic009G000700 Sobic004G261100 Sobic004G261100 Sobic001G293600--Sobic004G261100 Sobic001G286000 Sobic001G286000 Sobic001G293600--Sobic001G286000 Sobic010G088950--Sobic006G166300 Sobic010G088950--Sobic001G293600 Sobic008G127200 Sobic008G127200 Sobic010G088950--Sobic008G127200 Sobic002G043700 Sobic002G043700 Sobic010G088950--Sobic002G043700 Sobic003G231900 Sobic003G231900 Sobic010G088950--Sobic003G231900 Sobic010G088950--Sobic010G236700 Sobic007G017900 Sobic007G017900 Sobic010G088950--Sobic007G017900 Sobic010G022300 Sobic010G022300 Sobic010G088950--Sobic010G022300 Sobic003G022800 Sobic003G022800 Sobic010G088950--Sobic003G022800 Sobic006G182800--Sobic001G396300 Sobic004G227400 Sobic004G227400 Sobic006G182800--Sobic004G227400 Sobic003G373150 Sobic003G373150 Sobic006G182800--Sobic003G373150 Sobic004G283300 Sobic004G283300 Sobic006G182800--Sobic004G283300 Sobic004G283201 Sobic004G283201 Sobic006G182800--Sobic004G283201 Sobic006G055600 Sobic006G055600 Sobic006G182800--Sobic006G055600 Sobic010G076500 Sobic010G076500 Sobic006G182800--Sobic010G076500 Sobic006G005600 Sobic006G005600 Sobic006G182800--Sobic006G005600 Sobic004G310600 Sobic004G310600 Sobic006G182800--Sobic004G310600 Sobic001G159850--Sobic001G159850
Octagon: transcription factors


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