Gene annotation
Transcriptome id Sobic.001G003300.2,Sobic.001G003300.1
Synonym Sb01g000400
Functional annotation ABC-2 type transporter, putative, expressed
UniProt C5WRV6 , A0A1Z5S3V5
Pfam PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF200
NCBI CDD KOG0061; Transporter, ABC superfamily (Breast cancer resistance protein)
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT2G28070 : ABC-2 type transporter family protein
RAP-DB (Rice) LOC_Os03g64200.1 : ABC-2 type transporter, putative, expressed
MaizeGDB (Corn) Zm00025a009131
Brachypodium KQK11978
Barley HORVU5Hr1G125010.2 , HORVU5Hr1G125010.3 , HORVU5Hr1G125010.1 , HORVU5Hr1G125010.6 , HORVU5Hr1G125010.7 , HORVU5Hr1G125010.4 , HORVU5Hr1G125010.5 , HORVU5Hr1G125010.8 , HORVU5Hr1G125010.9 , HORVU5Hr1G125010.10 , HORVU5Hr1G125010.11 , HORVU5Hr1G125010.12 , HORVU5Hr1G125010.13 , HORVU5Hr1G125010.14 , HORVU5Hr1G125010.15 , HORVU5Hr1G125010.16 , HORVU5Hr1G125010.17 , HORVU5Hr1G125010.18 , HORVU5Hr1G125010.19 , HORVU5Hr1G125010.21 , HORVU5Hr1G125010.20
Wheat TraesCS4A02G315900 , TraesCS5D02G551400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G188200 RING-H2 finger protein, putative, expressed -
2 Sobic.004G328800 transferase family protein, putative, expressed -
3 Sobic.008G175933 - -
4 Sobic.006G044466 - -
5 Sobic.010G196200 OsSub51 - Putative Subtilisin homologue, expressed -
6 Sobic.001G190600 pleiotropic drug resistance protein 15, putative, expressed -
7 Sobic.005G025500 expressed protein -
8 Sobic.005G207600 - -
9 Sobic.010G146350 - -
10 Sobic.005G207550 - -
11 Sobic.006G137900 heavy metal-associated domain containing protein, expressed -
12 Sobic.010G228200 expressed protein -
13 Sobic.001G138500 expressed protein -
14 Sobic.004G122700 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
15 Sobic.008G008701 - -
16 Sobic.004G090900 nuclear ribonuclease Z, putative, expressed K00784: ribonuclease Z
17 Sobic.001G045300 ubiquitin family protein, putative, expressed -
18 Sobic.007G027400 MBTB16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
19 Sobic.007G120600 KED, putative, expressed -
20 Sobic.008G008601 - -


Gene co-expression network
sample Sobic001G003300 Sobic001G003300 Sobic002G188200 Sobic002G188200 Sobic001G003300--Sobic002G188200 Sobic004G328800 Sobic004G328800 Sobic001G003300--Sobic004G328800 Sobic008G175933 Sobic008G175933 Sobic001G003300--Sobic008G175933 Sobic006G044466 Sobic006G044466 Sobic001G003300--Sobic006G044466 Sobic010G196200 Sobic010G196200 Sobic001G003300--Sobic010G196200 Sobic001G190600 Sobic001G190600 Sobic001G003300--Sobic001G190600 Sobic005G025500 Sobic005G025500 Sobic001G003300--Sobic005G025500 Sobic005G207600 Sobic005G207600 Sobic001G003300--Sobic005G207600 Sobic010G146350 Sobic010G146350 Sobic001G003300--Sobic010G146350 Sobic002G188200--Sobic004G328800 Sobic002G188200--Sobic008G175933 Sobic002G188200--Sobic001G003300 Sobic002G188200--Sobic010G196200 Sobic002G188200--Sobic006G044466 Sobic008G045300 Sobic008G045300 Sobic002G188200--Sobic008G045300 Sobic009G142600 Sobic009G142600 Sobic002G188200--Sobic009G142600 Sobic002G188200--Sobic005G025500 Sobic008G008601 Sobic008G008601 Sobic002G188200--Sobic008G008601 Sobic004G328800--Sobic002G188200 Sobic004G328800--Sobic008G175933 Sobic004G328800--Sobic001G003300 Sobic004G328800--Sobic005G025500 Sobic004G328800--Sobic001G190600 Sobic004G013400 Sobic004G013400 Sobic004G328800--Sobic004G013400 Sobic004G122700 Sobic004G122700 Sobic004G328800--Sobic004G122700 Sobic005G207550 Sobic005G207550 Sobic004G328800--Sobic005G207550 Sobic001G138500 Sobic001G138500 Sobic004G328800--Sobic001G138500 Sobic004G090900 Sobic004G090900 Sobic008G175933--Sobic004G090900 Sobic008G175933--Sobic004G122700 Sobic008G008701 Sobic008G008701 Sobic008G175933--Sobic008G008701 Sobic001G033701 Sobic001G033701 Sobic008G175933--Sobic001G033701 Sobic002G046500 Sobic002G046500 Sobic008G175933--Sobic002G046500 Sobic001G045300 Sobic001G045300 Sobic008G175933--Sobic001G045300 Sobic007G027400 Sobic007G027400 Sobic008G175933--Sobic007G027400 Sobic008G175933--Sobic009G142600 Sobic002G084100 Sobic002G084100 Sobic008G175933--Sobic002G084100 Sobic006G044466--Sobic002G188200 Sobic004G325832 Sobic004G325832 Sobic006G044466--Sobic004G325832 Sobic006G044466--Sobic010G196200 Sobic006G044466--Sobic001G003300 Sobic006G044466--Sobic008G175933 Sobic006G044466--Sobic004G328800 Sobic008G005700 Sobic008G005700 Sobic006G044466--Sobic008G005700 Sobic002G152000 Sobic002G152000 Sobic006G044466--Sobic002G152000 Sobic006G044466--Sobic008G045300 Sobic010G196200--Sobic002G188200 Sobic003G250340 Sobic003G250340 Sobic010G196200--Sobic003G250340 Sobic010G196200--Sobic008G045300 Sobic010G196200--Sobic004G328800 Sobic010G196200--Sobic006G044466 Sobic010G196200--Sobic004G325832 Sobic010G196200--Sobic001G003300 Sobic010G196200--Sobic008G175933 Sobic010G196200--Sobic002G152000 Sobic001G190600--Sobic005G207550 Sobic001G190600--Sobic001G138500 Sobic001G190600--Sobic004G122700 Sobic006G137900 Sobic006G137900 Sobic001G190600--Sobic006G137900 Sobic001G190600--Sobic008G008701 Sobic001G190600--Sobic005G207600 Sobic001G190600--Sobic010G146350 Sobic001G190600--Sobic004G013400 Sobic010G228200 Sobic010G228200 Sobic001G190600--Sobic010G228200 Sobic005G025500--Sobic008G008601 Sobic005G014600 Sobic005G014600 Sobic005G025500--Sobic005G014600 Sobic005G025500--Sobic004G122700 Sobic005G025500--Sobic004G090900 Sobic008G069901 Sobic008G069901 Sobic005G025500--Sobic008G069901 Sobic005G025500--Sobic008G008701 Sobic002G063500 Sobic002G063500 Sobic005G025500--Sobic002G063500 Sobic001G452300 Sobic001G452300 Sobic005G025500--Sobic001G452300 Sobic005G025500--Sobic002G046500 Sobic005G207600--Sobic010G146350 Sobic005G207600--Sobic010G228200 Sobic005G207600--Sobic001G190600 Sobic005G207600--Sobic005G207550 Sobic001G060001 Sobic001G060001 Sobic005G207600--Sobic001G060001 Sobic007G120600 Sobic007G120600 Sobic005G207600--Sobic007G120600 Sobic005G207600--Sobic006G137900 Sobic005G207600--Sobic001G138500 Sobic004G052700 Sobic004G052700 Sobic005G207600--Sobic004G052700 Sobic010G146350--Sobic005G207600 Sobic010G146350--Sobic010G228200 Sobic010G146350--Sobic007G120600 Sobic010G146350--Sobic001G060001 Sobic010G146350--Sobic001G190600 Sobic010G146350--Sobic005G207550 Sobic010G146350--Sobic004G052700 Sobic008G096401 Sobic008G096401 Sobic010G146350--Sobic008G096401 Sobic010G146350--Sobic006G137900
Octagon: transcription factors


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