Gene annotation
Transcriptome id Sobic.001G029900.1
Synonym Sb01g002800, CRCK1
Functional annotation protein kinase domain containing protein, expressed
UniProt C5WU49
Pfam PF07714
Panther DB PTHR27003 PTHR27003:SF14
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G00330 : calmodulin-binding receptor-like cytoplasmic kinase 2
RAP-DB (Rice) LOC_Os03g61060.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016404
Brachypodium -
Barley -
Wheat TraesCS5B02G501300 , TraesCS5B02G501300 , TraesCS5B02G501300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G265300 lectin-like receptor kinase, putative, expressed -
2 Sobic.009G236500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.004G355401 - -
4 Sobic.001G457100 - -
5 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
6 Sobic.004G089700 - -
7 Sobic.007G206550 - -
8 Sobic.004G347866 - -
9 Sobic.007G157550 - -
10 Sobic.003G337700 WRKY20, expressed -
11 Sobic.002G339250 - -
12 Sobic.004G224300 5-azacytidine resistance protein related, putative, expressed -
13 Sobic.002G048250 - -
14 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.010G002850 - -
16 Sobic.003G083700 DNA binding protein, putative, expressed -
17 Sobic.004G226300 expressed protein -
18 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
19 Sobic.002G010500 expressed protein -
20 Sobic.010G156800 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic001G029900 Sobic001G029900 Sobic003G265300 Sobic003G265300 Sobic001G029900--Sobic003G265300 Sobic009G236500 Sobic009G236500 Sobic001G029900--Sobic009G236500 Sobic004G355401 Sobic004G355401 Sobic001G029900--Sobic004G355401 Sobic001G457100 Sobic001G457100 Sobic001G029900--Sobic001G457100 Sobic002G003100 Sobic002G003100 Sobic001G029900--Sobic002G003100 Sobic004G089700 Sobic004G089700 Sobic001G029900--Sobic004G089700 Sobic007G206550 Sobic007G206550 Sobic001G029900--Sobic007G206550 Sobic004G347866 Sobic004G347866 Sobic001G029900--Sobic004G347866 Sobic007G157550 Sobic007G157550 Sobic001G029900--Sobic007G157550 Sobic002G367850 Sobic002G367850 Sobic003G265300--Sobic002G367850 Sobic003G265300--Sobic007G206550 Sobic005G066800 Sobic005G066800 Sobic003G265300--Sobic005G066800 Sobic001G391000 Sobic001G391000 Sobic003G265300--Sobic001G391000 Sobic003G337700 Sobic003G337700 Sobic003G265300--Sobic003G337700 Sobic003G265300--Sobic004G355401 Sobic001G179680 Sobic001G179680 Sobic003G265300--Sobic001G179680 Sobic003G265300--Sobic001G457100 Sobic003G265300--Sobic007G157550 Sobic009G236500--Sobic003G337700 Sobic004G224300 Sobic004G224300 Sobic009G236500--Sobic004G224300 Sobic009G236500--Sobic004G089700 Sobic002G339250 Sobic002G339250 Sobic009G236500--Sobic002G339250 Sobic005G209800 Sobic005G209800 Sobic009G236500--Sobic005G209800 Sobic009G236500--Sobic001G457100 Sobic010G002850 Sobic010G002850 Sobic009G236500--Sobic010G002850 Sobic002G048250 Sobic002G048250 Sobic009G236500--Sobic002G048250 Sobic004G226300 Sobic004G226300 Sobic009G236500--Sobic004G226300 Sobic004G355401--Sobic001G457100 Sobic004G355401--Sobic007G157550 Sobic004G355401--Sobic004G347866 Sobic004G206900 Sobic004G206900 Sobic004G355401--Sobic004G206900 Sobic004G355401--Sobic005G066800 Sobic004G355401--Sobic007G206550 Sobic009G223700 Sobic009G223700 Sobic004G355401--Sobic009G223700 Sobic006G169300 Sobic006G169300 Sobic004G355401--Sobic006G169300 Sobic004G355401--Sobic002G339250 Sobic001G457100--Sobic009G223700 Sobic001G457100--Sobic004G347866 Sobic001G457100--Sobic004G089700 Sobic001G457100--Sobic004G226300 Sobic001G457100--Sobic002G048250 Sobic007G183000 Sobic007G183000 Sobic001G457100--Sobic007G183000 Sobic001G457100--Sobic007G157550 Sobic005G231800 Sobic005G231800 Sobic001G457100--Sobic005G231800 Sobic003G290700 Sobic003G290700 Sobic001G457100--Sobic003G290700 Sobic002G003100--Sobic005G209800 Sobic002G003100--Sobic005G231800 Sobic008G002100 Sobic008G002100 Sobic002G003100--Sobic008G002100 Sobic008G023000 Sobic008G023000 Sobic002G003100--Sobic008G023000 Sobic002G003100--Sobic004G226300 Sobic006G171000 Sobic006G171000 Sobic002G003100--Sobic006G171000 Sobic001G527400 Sobic001G527400 Sobic002G003100--Sobic001G527400 Sobic002G003100--Sobic007G183000 Sobic005G156700 Sobic005G156700 Sobic002G003100--Sobic005G156700 Sobic004G089700--Sobic002G048250 Sobic004G089700--Sobic007G183000 Sobic004G089700--Sobic005G231800 Sobic004G089700--Sobic008G023000 Sobic004G089700--Sobic001G527400 Sobic004G089700--Sobic004G226300 Sobic004G089700--Sobic008G002100 Sobic004G089700--Sobic005G209800 Sobic004G089700--Sobic004G347866 Sobic007G206550--Sobic007G157550 Sobic007G206550--Sobic004G347866 Sobic007G206550--Sobic001G179680 Sobic007G206550--Sobic001G457100 Sobic007G206550--Sobic004G089700 Sobic007G206550--Sobic002G048250 Sobic007G206550--Sobic007G183000 Sobic007G206550--Sobic004G355401 Sobic007G206550--Sobic004G224300 Sobic004G347866--Sobic007G157550 Sobic004G347866--Sobic002G048250 Sobic004G347866--Sobic007G183000 Sobic004G347866--Sobic004G089700 Sobic004G347866--Sobic001G457100 Sobic004G347866--Sobic004G226300 Sobic004G347866--Sobic009G223700 Sobic004G347866--Sobic001G527400 Sobic004G347866--Sobic002G339250 Sobic007G157550--Sobic004G347866 Sobic007G157550--Sobic002G048250 Sobic007G157550--Sobic001G457100 Sobic007G157550--Sobic004G089700 Sobic007G157550--Sobic007G183000 Sobic007G157550--Sobic009G223700 Sobic007G157550--Sobic001G179680 Sobic007G157550--Sobic002G339250 Sobic007G157550--Sobic004G226300
Octagon: transcription factors


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