Gene annotation
Transcriptome id Sobic.001G095366.1
Synonym -
Functional annotation -
UniProt A0A1Z5S5D0
Pfam PF08387 PF00646
Panther DB PTHR31639 PTHR31639:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G13570 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os04g57920.1 : OsFBX154 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G048500 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
2 Sobic.006G156200 - -
3 Sobic.004G099050 - -
4 Sobic.007G012500 - -
5 Sobic.005G131000 expressed protein -
6 Sobic.010G154400 expressed protein -
7 Sobic.009G019550 - -
8 Sobic.004G254300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
9 Sobic.010G035100 AP2 domain containing protein, expressed -
10 Sobic.002G258500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
11 Sobic.001G461600 cysteine proteinase inhibitor 8 precursor, putative, expressed -
12 Sobic.007G218400 - -
13 Sobic.009G059866 - -
14 Sobic.004G316000 DEFL74 - Defensin and Defensin-like DEFL family, expressed -
15 Sobic.002G346700 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.002G023500 expressed protein -
17 Sobic.009G059932 - -
18 Sobic.009G111301 - -
19 Sobic.003G231000 SbDFR2 expression was not detectable in the seedlings of either sorghum cultivar under our experimental conditions.(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
20 Sobic.006G239600 - -


Gene co-expression network
sample Sobic001G095366 Sobic001G095366 Sobic010G048500 Sobic010G048500 Sobic001G095366--Sobic010G048500 Sobic006G156200 Sobic006G156200 Sobic001G095366--Sobic006G156200 Sobic004G099050 Sobic004G099050 Sobic001G095366--Sobic004G099050 Sobic007G012500 Sobic007G012500 Sobic001G095366--Sobic007G012500 Sobic005G131000 Sobic005G131000 Sobic001G095366--Sobic005G131000 Sobic010G154400 Sobic010G154400 Sobic001G095366--Sobic010G154400 Sobic009G019550 Sobic009G019550 Sobic001G095366--Sobic009G019550 Sobic004G254300 Sobic004G254300 Sobic001G095366--Sobic004G254300 Sobic010G035100 Sobic010G035100 Sobic001G095366--Sobic010G035100 Sobic010G048500--Sobic005G131000 Sobic010G048500--Sobic006G156200 Sobic010G048500--Sobic009G019550 Sobic010G048500--Sobic004G254300 Sobic002G023500 Sobic002G023500 Sobic010G048500--Sobic002G023500 Sobic003G231000 Sobic003G231000 Sobic010G048500--Sobic003G231000 Sobic004G056500 Sobic004G056500 Sobic010G048500--Sobic004G056500 Sobic002G066350 Sobic002G066350 Sobic010G048500--Sobic002G066350 Sobic010G130900 Sobic010G130900 Sobic010G048500--Sobic010G130900 Sobic006G156200--Sobic010G048500 Sobic006G239600 Sobic006G239600 Sobic006G156200--Sobic006G239600 Sobic006G156200--Sobic005G131000 Sobic006G006400 Sobic006G006400 Sobic006G156200--Sobic006G006400 Sobic001G123650 Sobic001G123650 Sobic006G156200--Sobic001G123650 Sobic004G099050--Sobic010G154400 Sobic004G099050--Sobic007G012500 Sobic004G099050--Sobic004G254300 Sobic004G099050--Sobic001G123650 Sobic007G012500--Sobic004G099050 Sobic007G012500--Sobic010G154400 Sobic001G461600 Sobic001G461600 Sobic007G012500--Sobic001G461600 Sobic007G012500--Sobic004G254300 Sobic007G218400 Sobic007G218400 Sobic007G012500--Sobic007G218400 Sobic009G059866 Sobic009G059866 Sobic007G012500--Sobic009G059866 Sobic009G059932 Sobic009G059932 Sobic007G012500--Sobic009G059932 Sobic009G059800 Sobic009G059800 Sobic007G012500--Sobic009G059800 Sobic006G076000 Sobic006G076000 Sobic007G012500--Sobic006G076000 Sobic005G131000--Sobic010G048500 Sobic005G131000--Sobic006G156200 Sobic003G091700 Sobic003G091700 Sobic005G131000--Sobic003G091700 Sobic005G131000--Sobic002G066350 Sobic005G131000--Sobic003G231000 Sobic007G036200 Sobic007G036200 Sobic005G131000--Sobic007G036200 Sobic005G131000--Sobic004G254300 Sobic005G131000--Sobic002G023500 Sobic005G131000--Sobic010G130900 Sobic010G154400--Sobic004G099050 Sobic010G154400--Sobic007G012500 Sobic010G154400--Sobic001G461600 Sobic010G154400--Sobic004G254300 Sobic004G277501 Sobic004G277501 Sobic010G154400--Sobic004G277501 Sobic003G175300 Sobic003G175300 Sobic010G154400--Sobic003G175300 Sobic007G035900 Sobic007G035900 Sobic010G154400--Sobic007G035900 Sobic010G154400--Sobic007G218400 Sobic003G369800 Sobic003G369800 Sobic010G154400--Sobic003G369800 Sobic010G237400 Sobic010G237400 Sobic009G019550--Sobic010G237400 Sobic009G019550--Sobic003G369800 Sobic002G346700 Sobic002G346700 Sobic009G019550--Sobic002G346700 Sobic004G316000 Sobic004G316000 Sobic009G019550--Sobic004G316000 Sobic009G019550--Sobic004G056500 Sobic002G102800 Sobic002G102800 Sobic009G019550--Sobic002G102800 Sobic010G144600 Sobic010G144600 Sobic009G019550--Sobic010G144600 Sobic009G019550--Sobic009G059800 Sobic002G258500 Sobic002G258500 Sobic009G019550--Sobic002G258500 Sobic004G254300--Sobic009G059866 Sobic004G254300--Sobic009G059932 Sobic004G254300--Sobic007G218400 Sobic004G254300--Sobic004G056500 Sobic004G254300--Sobic002G102800 Sobic004G254300--Sobic009G059800 Sobic004G254300--Sobic010G237400 Sobic004G254300--Sobic003G369800 Sobic004G254300--Sobic010G144600 Sobic010G035100--Sobic002G258500 Sobic010G035100--Sobic002G346700 Sobic010G035100--Sobic006G006400 Sobic010G035100--Sobic004G316000 Sobic010G035100--Sobic009G019550 Sobic010G035100--Sobic002G023500 Sobic010G035100--Sobic006G239600 Sobic010G035100--Sobic001G123650
Octagon: transcription factors


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