Gene annotation
Transcriptome id Sobic.001G245200.1
Synonym Sb01g021720
Functional annotation zinc finger family protein, putative, expressed
UniProt A0A1B6QKR2
Pfam PF14624
Panther DB PTHR10579 PTHR10579:SF64
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54780 : Zinc finger (C3HC4-type RING finger) family protein
RAP-DB (Rice) LOC_Os03g28990.1 : zinc finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a054498 , Zm00025a055446
Brachypodium KQJ98245
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G167100 OsFBX378 - F-box domain containing protein, expressed -
2 Sobic.002G150100 hypothetical protein -
3 Sobic.002G150100 hypothetical protein -
4 Sobic.002G150100 hypothetical protein -
5 Sobic.003G344050 - -
6 Sobic.002G220800 expressed protein -
7 Sobic.007G108200 - -
8 Sobic.003G249050 - -
9 Sobic.009G099400 peptidase, T1 family, putative, expressed -
10 Sobic.004G061701 - -
11 Sobic.008G039501 - -
12 Sobic.009G008701 - K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
13 Sobic.004G023500 GATA zinc finger domain containing protein, expressed -
14 Sobic.009G199100 gamma-glutamyl hydrolase precursor, putative, expressed K01307: gamma-glutamyl hydrolase
15 Sobic.008G146000 - -
16 Sobic.002G195500 Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed -
17 Sobic.008G157800 BURP domain containing protein, expressed -
18 Sobic.002G130601 - -
19 Sobic.002G150301 - -
20 Sobic.006G053050 - -


Gene co-expression network
sample Sobic001G245200 Sobic001G245200 Sobic010G167100 Sobic010G167100 Sobic001G245200--Sobic010G167100 Sobic002G150100 Sobic002G150100 Sobic001G245200--Sobic002G150100 Sobic003G344050 Sobic003G344050 Sobic001G245200--Sobic003G344050 Sobic002G220800 Sobic002G220800 Sobic001G245200--Sobic002G220800 Sobic007G108200 Sobic007G108200 Sobic001G245200--Sobic007G108200 Sobic003G249050 Sobic003G249050 Sobic001G245200--Sobic003G249050 Sobic009G099400 Sobic009G099400 Sobic001G245200--Sobic009G099400 Sobic010G167100--Sobic001G245200 Sobic008G186800 Sobic008G186800 Sobic010G167100--Sobic008G186800 Sobic009G008701 Sobic009G008701 Sobic010G167100--Sobic009G008701 Sobic010G167100--Sobic003G249050 Sobic006G053050 Sobic006G053050 Sobic010G167100--Sobic006G053050 Sobic010G167100--Sobic002G150100 Sobic010G167100--Sobic003G344050 Sobic002G150100--Sobic002G150100 Sobic002G150100--Sobic003G344050 Sobic002G150100--Sobic002G220800 Sobic002G150100--Sobic007G108200 Sobic002G150100--Sobic003G249050 Sobic004G061701 Sobic004G061701 Sobic002G150100--Sobic004G061701 Sobic008G039501 Sobic008G039501 Sobic002G150100--Sobic008G039501 Sobic004G023500 Sobic004G023500 Sobic002G150100--Sobic004G023500 Sobic003G344050--Sobic002G150100 Sobic003G344050--Sobic002G220800 Sobic003G344050--Sobic007G108200 Sobic003G344050--Sobic003G249050 Sobic003G344050--Sobic004G061701 Sobic003G344050--Sobic008G039501 Sobic003G344050--Sobic004G023500 Sobic002G220800--Sobic002G150100 Sobic002G220800--Sobic003G344050 Sobic002G220800--Sobic007G108200 Sobic002G220800--Sobic003G249050 Sobic002G220800--Sobic004G061701 Sobic002G220800--Sobic008G039501 Sobic002G220800--Sobic004G023500 Sobic007G108200--Sobic002G150100 Sobic007G108200--Sobic003G344050 Sobic007G108200--Sobic002G220800 Sobic007G108200--Sobic003G249050 Sobic007G108200--Sobic004G061701 Sobic007G108200--Sobic008G039501 Sobic007G108200--Sobic004G023500 Sobic003G249050--Sobic002G150100 Sobic003G249050--Sobic003G344050 Sobic003G249050--Sobic002G220800 Sobic003G249050--Sobic007G108200 Sobic003G249050--Sobic008G039501 Sobic003G249050--Sobic004G061701 Sobic003G249050--Sobic004G023500 Sobic009G099400--Sobic004G023500 Sobic009G099400--Sobic002G150100 Sobic009G099400--Sobic003G344050 Sobic009G099400--Sobic007G108200 Sobic009G099400--Sobic002G220800 Sobic009G099400--Sobic004G061701 Sobic009G099400--Sobic003G249050
Octagon: transcription factors


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