Gene annotation
Transcriptome id Sobic.009G099400.1
Synonym ATPAE1, PAE1
Functional annotation peptidase, T1 family, putative, expressed
UniProt A0A1B6P7K8
Pfam PF00227
Panther DB PTHR11599 PTHR11599:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005839; proteasome core complex GO:0004298threonine-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G53850 : 20S proteasome alpha subunit E1
RAP-DB (Rice) LOC_Os11g40140.1 : peptidase, T1 family, putative, expressed
MaizeGDB (Corn) Zm00025a000672 , Zm00025a053425
Brachypodium KQJ87824
Barley HORVU4Hr1G040770.5 , HORVU4Hr1G040770.6 , HORVU4Hr1G040770.7 , HORVU4Hr1G040770.1 , HORVU4Hr1G040770.2 , HORVU4Hr1G040770.8 , HORVU4Hr1G040770.9
Wheat TraesCS4B02G151700 , TraesCS4A02G167300 , TraesCS4D02G157700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G023500 GATA zinc finger domain containing protein, expressed -
2 Sobic.002G150100 hypothetical protein -
3 Sobic.002G150100 hypothetical protein -
4 Sobic.002G150100 hypothetical protein -
5 Sobic.003G344050 - -
6 Sobic.007G108200 - -
7 Sobic.002G220800 expressed protein -
8 Sobic.004G061701 - -
9 Sobic.003G249050 - -
10 Sobic.008G039501 - -
11 Sobic.008G157800 BURP domain containing protein, expressed -
12 Sobic.009G008701 - K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
13 Sobic.008G146000 - -
14 Sobic.001G253000 - -
15 Sobic.002G195500 Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed -
16 Sobic.007G065900 Cupin domain containing protein, expressed -
17 Sobic.007G065800 Cupin domain containing protein, expressed -
18 Sobic.002G150301 - -
19 Sobic.009G199100 gamma-glutamyl hydrolase precursor, putative, expressed K01307: gamma-glutamyl hydrolase
20 Sobic.003G112300 expressed protein -


Gene co-expression network
sample Sobic009G099400 Sobic009G099400 Sobic004G023500 Sobic004G023500 Sobic009G099400--Sobic004G023500 Sobic002G150100 Sobic002G150100 Sobic009G099400--Sobic002G150100 Sobic003G344050 Sobic003G344050 Sobic009G099400--Sobic003G344050 Sobic007G108200 Sobic007G108200 Sobic009G099400--Sobic007G108200 Sobic002G220800 Sobic002G220800 Sobic009G099400--Sobic002G220800 Sobic004G061701 Sobic004G061701 Sobic009G099400--Sobic004G061701 Sobic003G249050 Sobic003G249050 Sobic009G099400--Sobic003G249050 Sobic004G023500--Sobic004G061701 Sobic008G157800 Sobic008G157800 Sobic004G023500--Sobic008G157800 Sobic004G023500--Sobic009G099400 Sobic007G065900 Sobic007G065900 Sobic004G023500--Sobic007G065900 Sobic004G023500--Sobic003G344050 Sobic004G023500--Sobic002G150100 Sobic004G023500--Sobic002G220800 Sobic002G150100--Sobic002G150100 Sobic002G150100--Sobic003G344050 Sobic002G150100--Sobic002G220800 Sobic002G150100--Sobic007G108200 Sobic002G150100--Sobic003G249050 Sobic002G150100--Sobic004G061701 Sobic008G039501 Sobic008G039501 Sobic002G150100--Sobic008G039501 Sobic002G150100--Sobic004G023500 Sobic003G344050--Sobic002G150100 Sobic003G344050--Sobic002G220800 Sobic003G344050--Sobic007G108200 Sobic003G344050--Sobic003G249050 Sobic003G344050--Sobic004G061701 Sobic003G344050--Sobic008G039501 Sobic003G344050--Sobic004G023500 Sobic007G108200--Sobic002G150100 Sobic007G108200--Sobic003G344050 Sobic007G108200--Sobic002G220800 Sobic007G108200--Sobic003G249050 Sobic007G108200--Sobic004G061701 Sobic007G108200--Sobic008G039501 Sobic007G108200--Sobic004G023500 Sobic002G220800--Sobic002G150100 Sobic002G220800--Sobic003G344050 Sobic002G220800--Sobic007G108200 Sobic002G220800--Sobic003G249050 Sobic002G220800--Sobic004G061701 Sobic002G220800--Sobic008G039501 Sobic002G220800--Sobic004G023500 Sobic004G061701--Sobic003G344050 Sobic004G061701--Sobic002G150100 Sobic004G061701--Sobic007G108200 Sobic004G061701--Sobic002G220800 Sobic004G061701--Sobic008G039501 Sobic004G061701--Sobic003G249050 Sobic004G061701--Sobic008G157800 Sobic003G249050--Sobic002G150100 Sobic003G249050--Sobic003G344050 Sobic003G249050--Sobic002G220800 Sobic003G249050--Sobic007G108200 Sobic003G249050--Sobic008G039501 Sobic003G249050--Sobic004G061701 Sobic003G249050--Sobic004G023500
Octagon: transcription factors


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