Gene annotation
Transcriptome id Sobic.001G253000.1
Synonym
Functional annotation -
UniProt A0A1B6QKW9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a032408
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G099400 peptidase, T1 family, putative, expressed -
2 Sobic.002G195500 Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed -
3 Sobic.004G061701 - -
4 Sobic.007G108200 - -
5 Sobic.004G023500 GATA zinc finger domain containing protein, expressed -
6 Sobic.003G344050 - -
7 Sobic.002G150100 hypothetical protein -
8 Sobic.002G150100 hypothetical protein -
9 Sobic.002G150100 hypothetical protein -
10 Sobic.008G157800 BURP domain containing protein, expressed -
11 Sobic.002G220800 expressed protein -
12 Sobic.003G249050 - -
13 Sobic.008G039501 - -
14 Sobic.009G008701 - K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
15 Sobic.007G065900 Cupin domain containing protein, expressed -
16 Sobic.003G112300 expressed protein -
17 Sobic.010G229075 - -
18 Sobic.002G150301 - -
19 Sobic.009G199100 gamma-glutamyl hydrolase precursor, putative, expressed K01307: gamma-glutamyl hydrolase
20 Sobic.008G146000 - -


Gene co-expression network
sample Sobic001G253000 Sobic001G253000 Sobic009G099400 Sobic009G099400 Sobic001G253000--Sobic009G099400 Sobic002G195500 Sobic002G195500 Sobic001G253000--Sobic002G195500 Sobic004G061701 Sobic004G061701 Sobic001G253000--Sobic004G061701 Sobic007G108200 Sobic007G108200 Sobic001G253000--Sobic007G108200 Sobic004G023500 Sobic004G023500 Sobic001G253000--Sobic004G023500 Sobic003G344050 Sobic003G344050 Sobic001G253000--Sobic003G344050 Sobic002G150100 Sobic002G150100 Sobic001G253000--Sobic002G150100 Sobic009G099400--Sobic004G023500 Sobic009G099400--Sobic002G150100 Sobic009G099400--Sobic003G344050 Sobic009G099400--Sobic007G108200 Sobic002G220800 Sobic002G220800 Sobic009G099400--Sobic002G220800 Sobic009G099400--Sobic004G061701 Sobic003G249050 Sobic003G249050 Sobic009G099400--Sobic003G249050 Sobic002G195500--Sobic002G150100 Sobic002G195500--Sobic003G344050 Sobic002G195500--Sobic002G220800 Sobic002G195500--Sobic007G108200 Sobic002G195500--Sobic003G249050 Sobic002G195500--Sobic004G061701 Sobic008G039501 Sobic008G039501 Sobic002G195500--Sobic008G039501 Sobic004G061701--Sobic003G344050 Sobic004G061701--Sobic002G150100 Sobic004G061701--Sobic007G108200 Sobic004G061701--Sobic002G220800 Sobic004G061701--Sobic008G039501 Sobic004G061701--Sobic003G249050 Sobic008G157800 Sobic008G157800 Sobic004G061701--Sobic008G157800 Sobic007G108200--Sobic002G150100 Sobic007G108200--Sobic003G344050 Sobic007G108200--Sobic002G220800 Sobic007G108200--Sobic003G249050 Sobic007G108200--Sobic004G061701 Sobic007G108200--Sobic008G039501 Sobic007G108200--Sobic004G023500 Sobic004G023500--Sobic004G061701 Sobic004G023500--Sobic008G157800 Sobic004G023500--Sobic009G099400 Sobic007G065900 Sobic007G065900 Sobic004G023500--Sobic007G065900 Sobic004G023500--Sobic003G344050 Sobic004G023500--Sobic002G150100 Sobic004G023500--Sobic002G220800 Sobic003G344050--Sobic002G150100 Sobic003G344050--Sobic002G220800 Sobic003G344050--Sobic007G108200 Sobic003G344050--Sobic003G249050 Sobic003G344050--Sobic004G061701 Sobic003G344050--Sobic008G039501 Sobic003G344050--Sobic004G023500 Sobic002G150100--Sobic002G150100 Sobic002G150100--Sobic003G344050 Sobic002G150100--Sobic002G220800 Sobic002G150100--Sobic007G108200 Sobic002G150100--Sobic003G249050 Sobic002G150100--Sobic004G061701 Sobic002G150100--Sobic008G039501 Sobic002G150100--Sobic004G023500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.