Gene annotation
Transcriptome id Sobic.003G112300.1
Synonym Sb03g009440
Functional annotation expressed protein
UniProt C5XFR0
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF118
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G52760 : Copper transport protein family
RAP-DB (Rice) LOC_Os01g14700.1 : expressed protein
MaizeGDB (Corn) Zm00025a023916
Brachypodium -
Barley -
Wheat TraesCS3D02G176200 , TraesCS3D02G176200
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G065900 Cupin domain containing protein, expressed -
2 Sobic.008G170100 phospholipase, putative, expressed -
3 Sobic.008G157800 BURP domain containing protein, expressed -
4 Sobic.010G229075 - -
5 Sobic.009G141000 KH domain containing protein, putative, expressed K14945: protein quaking
6 Sobic.009G139700 - -
7 Sobic.004G023500 GATA zinc finger domain containing protein, expressed -
8 Sobic.004G292001 - -
9 Sobic.010G085500 VIP1 protein, putative, expressed -
10 Sobic.010G113600 vignain precursor, putative, expressed -
11 Sobic.005G005600 prenylated rab acceptor, putative, expressed -
12 Sobic.004G061701 - -
13 Sobic.010G088700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
14 Sobic.009G217700 - -
15 Sobic.003G319700 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
16 Sobic.002G368500 B12D protein, putative, expressed -
17 Sobic.001G449600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@non-symbiotic hemoglobin 2, putative, expressed -
18 Sobic.003G082100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
19 Sobic.003G082200 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
20 Sobic.009G099400 peptidase, T1 family, putative, expressed -


Gene co-expression network
sample Sobic003G112300 Sobic003G112300 Sobic007G065900 Sobic007G065900 Sobic003G112300--Sobic007G065900 Sobic008G170100 Sobic008G170100 Sobic003G112300--Sobic008G170100 Sobic008G157800 Sobic008G157800 Sobic003G112300--Sobic008G157800 Sobic010G229075 Sobic010G229075 Sobic003G112300--Sobic010G229075 Sobic009G141000 Sobic009G141000 Sobic003G112300--Sobic009G141000 Sobic009G139700 Sobic009G139700 Sobic003G112300--Sobic009G139700 Sobic004G023500 Sobic004G023500 Sobic003G112300--Sobic004G023500 Sobic004G292001 Sobic004G292001 Sobic003G112300--Sobic004G292001 Sobic010G085500 Sobic010G085500 Sobic003G112300--Sobic010G085500 Sobic007G065900--Sobic008G157800 Sobic007G065900--Sobic004G023500 Sobic010G113600 Sobic010G113600 Sobic007G065900--Sobic010G113600 Sobic004G061701 Sobic004G061701 Sobic007G065900--Sobic004G061701 Sobic007G065900--Sobic004G292001 Sobic007G065900--Sobic008G170100 Sobic007G065900--Sobic003G112300 Sobic008G039501 Sobic008G039501 Sobic007G065900--Sobic008G039501 Sobic007G065800 Sobic007G065800 Sobic007G065900--Sobic007G065800 Sobic007G030400 Sobic007G030400 Sobic008G170100--Sobic007G030400 Sobic003G082200 Sobic003G082200 Sobic008G170100--Sobic003G082200 Sobic008G170100--Sobic010G085500 Sobic003G082100 Sobic003G082100 Sobic008G170100--Sobic003G082100 Sobic008G170100--Sobic007G065900 Sobic008G170100--Sobic003G112300 Sobic008G170100--Sobic008G157800 Sobic008G170100--Sobic009G139700 Sobic007G039600 Sobic007G039600 Sobic008G170100--Sobic007G039600 Sobic008G157800--Sobic004G061701 Sobic008G157800--Sobic007G065900 Sobic008G157800--Sobic004G023500 Sobic008G157800--Sobic008G039501 Sobic003G344050 Sobic003G344050 Sobic008G157800--Sobic003G344050 Sobic002G150100 Sobic002G150100 Sobic008G157800--Sobic002G150100 Sobic007G108200 Sobic007G108200 Sobic008G157800--Sobic007G108200 Sobic010G229075--Sobic003G112300 Sobic010G229075--Sobic009G141000 Sobic010G229075--Sobic007G065900 Sobic005G203100 Sobic005G203100 Sobic010G229075--Sobic005G203100 Sobic002G310500 Sobic002G310500 Sobic010G229075--Sobic002G310500 Sobic010G229075--Sobic004G023500 Sobic001G253000 Sobic001G253000 Sobic010G229075--Sobic001G253000 Sobic010G006100 Sobic010G006100 Sobic010G229075--Sobic010G006100 Sobic009G099400 Sobic009G099400 Sobic010G229075--Sobic009G099400 Sobic010G088700 Sobic010G088700 Sobic009G141000--Sobic010G088700 Sobic003G301600 Sobic003G301600 Sobic009G141000--Sobic003G301600 Sobic005G051500 Sobic005G051500 Sobic009G141000--Sobic005G051500 Sobic003G156200 Sobic003G156200 Sobic009G141000--Sobic003G156200 Sobic009G141000--Sobic003G112300 Sobic003G364000 Sobic003G364000 Sobic009G141000--Sobic003G364000 Sobic005G033900 Sobic005G033900 Sobic009G141000--Sobic005G033900 Sobic010G259500 Sobic010G259500 Sobic009G141000--Sobic010G259500 Sobic005G071100 Sobic005G071100 Sobic009G141000--Sobic005G071100 Sobic009G217700 Sobic009G217700 Sobic009G139700--Sobic009G217700 Sobic009G139700--Sobic003G364000 Sobic005G013600 Sobic005G013600 Sobic009G139700--Sobic005G013600 Sobic009G139700--Sobic005G203100 Sobic001G449600 Sobic001G449600 Sobic009G139700--Sobic001G449600 Sobic007G166000 Sobic007G166000 Sobic009G139700--Sobic007G166000 Sobic007G005700 Sobic007G005700 Sobic009G139700--Sobic007G005700 Sobic009G139700--Sobic010G113600 Sobic003G088500 Sobic003G088500 Sobic009G139700--Sobic003G088500 Sobic004G023500--Sobic004G061701 Sobic004G023500--Sobic008G157800 Sobic004G023500--Sobic009G099400 Sobic004G023500--Sobic007G065900 Sobic004G023500--Sobic003G344050 Sobic004G023500--Sobic002G150100 Sobic002G220800 Sobic002G220800 Sobic004G023500--Sobic002G220800 Sobic004G292001--Sobic007G065900 Sobic004G292001--Sobic007G065800 Sobic002G130601 Sobic002G130601 Sobic004G292001--Sobic002G130601 Sobic003G364950 Sobic003G364950 Sobic004G292001--Sobic003G364950 Sobic004G292001--Sobic008G157800 Sobic005G213500 Sobic005G213500 Sobic004G292001--Sobic005G213500 Sobic004G278400 Sobic004G278400 Sobic004G292001--Sobic004G278400 Sobic004G292001--Sobic004G023500 Sobic004G292001--Sobic007G030400 Sobic010G085500--Sobic007G030400 Sobic010G085500--Sobic008G170100 Sobic010G085500--Sobic007G039600 Sobic010G085500--Sobic005G051500 Sobic010G085500--Sobic010G259500 Sobic002G368500 Sobic002G368500 Sobic010G085500--Sobic002G368500 Sobic001G365100 Sobic001G365100 Sobic010G085500--Sobic001G365100 Sobic005G011200 Sobic005G011200 Sobic010G085500--Sobic005G011200 Sobic010G085500--Sobic003G364000
Octagon: transcription factors


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