Gene annotation
Transcriptome id Sobic.001G261700.1
Synonym SbLBD5, lateral organ boundaries, Sb01g024400, LBD18
Functional annotation "domain confirmed by Pfam database, expression induced by IAA and BR treatments" (PubMedID : 20499123)
DUF260 domain containing protein, putative, expressed
UniProt A0A1B6QL50
Pfam PF03195
Panther DB PTHR31529 PTHR31529:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45420 : LOB domain-containing protein 18
RAP-DB (Rice) LOC_Os10g07510.1 : DUF260 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a052884 , Zm00025a000663 , Zm00025a003841 , Zm00025a023282 , Zm00025a001561
Brachypodium KQJ96334 , KQK22581 , KQK23639 , KQK23638
Barley HORVU3Hr1G016690.3 , HORVU3Hr1G016690.2 , HORVU3Hr1G016690.1 , HORVU4Hr1G013630.9 , HORVU4Hr1G013630.5 , HORVU4Hr1G013630.4 , HORVU4Hr1G013630.7 , HORVU4Hr1G013630.6 , HORVU4Hr1G013630.1 , HORVU4Hr1G013630.3 , HORVU4Hr1G013630.2 , HORVU4Hr1G013630.11 , HORVU4Hr1G013630.10 , HORVU4Hr1G013630.8 , HORVU4Hr1G063160.6 , HORVU4Hr1G063160.4 , HORVU4Hr1G063160.5 , HORVU4Hr1G063160.2 , HORVU4Hr1G063160.3 , HORVU4Hr1G063160.1
Wheat TraesCS4B02G224600 , TraesCS4D02G225200 , TraesCS4A02G067300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G284700 - -
2 Sobic.005G147500 - -
3 Sobic.006G264800 GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
4 Sobic.009G057100 - -
5 Sobic.005G188800 - -
6 Sobic.002G172100 receptor-like protein kinase 5 precursor, putative, expressed -
7 Sobic.009G112200 OsFBX361 - F-box domain containing protein, expressed -
8 Sobic.001G511400 BES1/BZR1 homolog protein, putative, expressed -
9 Sobic.002G172200 receptor-like protein kinase 5 precursor, putative, expressed -
10 Sobic.003G294800 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.009G058300 expressed protein -
12 Sobic.010G047300 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.005G033400 heavy-metal-associated domain-containing protein, putative, expressed -
14 Sobic.008G109600 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
15 Sobic.006G081400 - -
16 Sobic.001G274025 - -
17 Sobic.005G082300 - -
18 Sobic.002G161600 B3 DNA binding domain containing protein, expressed -
19 Sobic.005G176800 expressed protein -
20 Sobic.002G015500 OsFBD13 - F-box and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic001G261700 Sobic001G261700 Sobic001G284700 Sobic001G284700 Sobic001G261700--Sobic001G284700 Sobic005G147500 Sobic005G147500 Sobic001G261700--Sobic005G147500 Sobic006G264800 Sobic006G264800 Sobic001G261700--Sobic006G264800 Sobic009G057100 Sobic009G057100 Sobic001G261700--Sobic009G057100 Sobic005G188800 Sobic005G188800 Sobic001G261700--Sobic005G188800 Sobic002G172100 Sobic002G172100 Sobic001G261700--Sobic002G172100 Sobic009G112200 Sobic009G112200 Sobic001G261700--Sobic009G112200 Sobic001G511400 Sobic001G511400 Sobic001G261700--Sobic001G511400 Sobic002G172200 Sobic002G172200 Sobic001G261700--Sobic002G172200 Sobic001G284700--Sobic005G147500 Sobic009G058300 Sobic009G058300 Sobic001G284700--Sobic009G058300 Sobic001G284700--Sobic002G172100 Sobic001G284700--Sobic006G264800 Sobic001G284700--Sobic009G057100 Sobic001G284700--Sobic001G511400 Sobic003G294800 Sobic003G294800 Sobic001G284700--Sobic003G294800 Sobic001G284700--Sobic009G112200 Sobic001G284700--Sobic005G188800 Sobic005G147500--Sobic009G057100 Sobic005G147500--Sobic005G188800 Sobic005G147500--Sobic001G284700 Sobic006G081400 Sobic006G081400 Sobic005G147500--Sobic006G081400 Sobic005G147500--Sobic002G172100 Sobic005G147500--Sobic003G294800 Sobic005G147500--Sobic009G058300 Sobic005G147500--Sobic002G172200 Sobic005G082300 Sobic005G082300 Sobic005G147500--Sobic005G082300 Sobic001G274025 Sobic001G274025 Sobic006G264800--Sobic001G274025 Sobic006G264800--Sobic002G172100 Sobic009G021400 Sobic009G021400 Sobic006G264800--Sobic009G021400 Sobic001G489075 Sobic001G489075 Sobic006G264800--Sobic001G489075 Sobic006G264800--Sobic003G294800 Sobic006G264800--Sobic009G112200 Sobic003G106400 Sobic003G106400 Sobic006G264800--Sobic003G106400 Sobic006G264800--Sobic009G058300 Sobic006G264800--Sobic001G284700 Sobic009G057100--Sobic005G147500 Sobic009G057100--Sobic006G081400 Sobic004G071100 Sobic004G071100 Sobic009G057100--Sobic004G071100 Sobic009G057100--Sobic005G188800 Sobic005G033400 Sobic005G033400 Sobic009G057100--Sobic005G033400 Sobic009G057100--Sobic001G284700 Sobic002G015500 Sobic002G015500 Sobic009G057100--Sobic002G015500 Sobic004G029800 Sobic004G029800 Sobic009G057100--Sobic004G029800 Sobic009G057100--Sobic003G294800 Sobic005G188800--Sobic003G294800 Sobic005G188800--Sobic006G081400 Sobic005G188800--Sobic005G147500 Sobic005G188800--Sobic004G029800 Sobic005G188800--Sobic009G057100 Sobic005G188800--Sobic005G082300 Sobic005G188800--Sobic002G172100 Sobic008G109600 Sobic008G109600 Sobic005G188800--Sobic008G109600 Sobic005G188800--Sobic005G033400 Sobic002G172100--Sobic003G294800 Sobic002G172100--Sobic006G264800 Sobic002G172100--Sobic002G172200 Sobic002G172100--Sobic005G147500 Sobic002G172100--Sobic005G082300 Sobic003G266100 Sobic003G266100 Sobic002G172100--Sobic003G266100 Sobic002G172100--Sobic009G058300 Sobic002G172100--Sobic001G284700 Sobic002G172100--Sobic001G274025 Sobic009G112200--Sobic006G264800 Sobic009G112200--Sobic001G274025 Sobic009G112200--Sobic003G294800 Sobic009G112200--Sobic002G172100 Sobic009G112200--Sobic001G284700 Sobic009G112200--Sobic005G188800 Sobic009G112200--Sobic005G147500 Sobic009G112200--Sobic009G021400 Sobic009G112200--Sobic005G082300 Sobic002G015400 Sobic002G015400 Sobic001G511400--Sobic002G015400 Sobic001G511400--Sobic002G172200 Sobic008G159300 Sobic008G159300 Sobic001G511400--Sobic008G159300 Sobic001G511400--Sobic002G172100 Sobic001G511400--Sobic003G266100 Sobic001G511400--Sobic005G147500 Sobic001G511400--Sobic001G284700 Sobic001G511400--Sobic009G058300 Sobic001G511400--Sobic005G082300 Sobic002G172200--Sobic005G082300 Sobic002G172200--Sobic002G172100 Sobic002G172200--Sobic003G266100 Sobic002G172200--Sobic001G511400 Sobic002G172200--Sobic003G294800 Sobic002G172200--Sobic005G147500 Sobic002G172200--Sobic002G015400 Sobic002G172200--Sobic005G188800 Sobic002G172200--Sobic001G284700
Octagon: transcription factors


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