Gene annotation
| Transcriptome id |
Sobic.001G275100.1 |
|---|
| Synonym |
Sb01g027000 |
|---|
| Functional annotation |
oxidoreductase, aldo/keto reductase family protein, putative, expressed |
|---|
| UniProt |
C5WPW3 |
|---|
| Pfam |
PF00248 |
|---|
| Panther DB |
PTHR11732
PTHR11732:SF237 |
|---|
| NCBI CDD |
- |
|---|
| KEGG Orthology |
- |
|---|
| Gene Ontology |
- |
|---|
Orthologs (automatic annotation)
| TAIR |
AT1G59960 : NAD(P)-linked oxidoreductase superfamily protein |
|---|
| RAP-DB (Rice) |
LOC_Os10g02480.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed |
|---|
| MaizeGDB (Corn) |
Zm00025a003685 |
|---|
| Brachypodium |
- |
|---|
| Barley |
- |
|---|
| Wheat |
- |
|---|
| Populus |
- |
|---|
JBrowse
Expression pattern by RNA-Seq analysis
| FPKM plot |
 |
Find similar expressed genes
| Top 20 genes with similar expressed profiles |
 |
| Rank |
Gene |
Function |
KEGG orthology |
|---|
| 1 |
Sobic.002G092500 |
harpin-induced protein 1 domain containing protein, expressed |
- |
| 2 |
Sobic.001G261750 |
- |
- |
| 3 |
Sobic.001G261750 |
- |
- |
| 4 |
Sobic.001G261750 |
- |
- |
| 5 |
Sobic.001G261750 |
- |
- |
| 6 |
Sobic.001G261750 |
- |
- |
| 7 |
Sobic.001G494600 |
expressed protein |
- |
| 8 |
Sobic.002G403300 |
expressed protein |
- |
| 9 |
Sobic.007G165701 |
- |
- |
| 10 |
Sobic.002G093600 |
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed |
- |
| 11 |
Sobic.009G014600 |
Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed |
- |
| 12 |
Sobic.008G028533 |
- |
- |
| 13 |
Sobic.002G391700 |
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed |
K00430: peroxidase |
| 14 |
Sobic.008G145200 |
aspartic proteinase nepenthesin precursor, putative, expressed |
- |
| 15 |
Sobic.006G007300 |
- |
- |
| 16 |
Sobic.002G224300 |
no apical meristem protein, putative, expressed |
- |
| 17 |
Sobic.006G078500 |
abscisic stress-ripening, putative, expressed |
- |
| 18 |
Sobic.001G187600 |
cytochrome P450, putative, expressed |
K12153: phenylalanine N-monooxygenase |
| 19 |
Sobic.008G077800 |
GDSL-like lipase/acylhydrolase, putative, expressed |
- |
| 20 |
Sobic.008G028566 |
- |
- |
Gene co-expression network
|
|
Octagon: transcription factors
