Gene annotation
Transcriptome id Sobic.001G374600.2,Sobic.001G374600.1
Synonym Sb01g035570
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)" (PubMedID : 27586543)
desiccation-related protein PCC13-62 precursor, putative, expressed
UniProt A0A1B6QN98
Pfam PF13668
Panther DB PTHR31694 PTHR31694:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62730 : -
RAP-DB (Rice) LOC_Os03g22470.1 : desiccation-related protein PCC13-62 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a002414
Brachypodium KQK21726
Barley HORVU7Hr1G100130.8 , HORVU7Hr1G100130.9 , HORVU7Hr1G100130.2 , HORVU7Hr1G100130.3 , HORVU7Hr1G100130.1 , HORVU7Hr1G100130.6 , HORVU7Hr1G100130.4 , HORVU7Hr1G100130.5 , HORVU7Hr1G100130.10
Wheat TraesCS7B02G337000 , TraesCS7B02G337300 , TraesCS7A02G438300 , TraesCS7A02G438300 , TraesCS7D02G428200
Populus -


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cDNA sequences
Sobic.001G374600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G174200 - -
2 Sobic.003G211600 - -
3 Sobic.007G032500 WD domain, G-beta repeat domain containing protein, expressed K11462: polycomb protein EED
4 Sobic.005G173900 - -
5 Sobic.005G033600 heavy-metal-associated domain-containing protein, putative, expressed -
6 Sobic.006G070830 - K01193: INV, beta-fructofuranosidase
7 Sobic.001G495700 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
8 Sobic.003G091500 expressed protein -
9 Sobic.008G184100 aspartic proteinase, putative, expressed -
10 Sobic.002G108300 expressed protein -
11 Sobic.005G226800 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
12 Sobic.009G062300 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
13 Sobic.005G174500 - -
14 Sobic.009G058300 expressed protein -
15 Sobic.010G133150 - -
16 Sobic.008G088900 hypothetical protein -
17 Sobic.007G066200 - -
18 Sobic.002G267700 bZIP family transcription factor, putative, expressed -
19 Sobic.002G015400 OsFBD13 - F-box and FBD domain containing protein, expressed -
20 Sobic.009G139500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -


Gene co-expression network
sample Sobic001G374600 Sobic001G374600 Sobic005G174200 Sobic005G174200 Sobic001G374600--Sobic005G174200 Sobic003G211600 Sobic003G211600 Sobic001G374600--Sobic003G211600 Sobic007G032500 Sobic007G032500 Sobic001G374600--Sobic007G032500 Sobic005G173900 Sobic005G173900 Sobic001G374600--Sobic005G173900 Sobic005G033600 Sobic005G033600 Sobic001G374600--Sobic005G033600 Sobic006G070830 Sobic006G070830 Sobic001G374600--Sobic006G070830 Sobic001G495700 Sobic001G495700 Sobic001G374600--Sobic001G495700 Sobic003G091500 Sobic003G091500 Sobic001G374600--Sobic003G091500 Sobic008G184100 Sobic008G184100 Sobic001G374600--Sobic008G184100 Sobic005G174200--Sobic007G032500 Sobic005G174200--Sobic001G374600 Sobic002G108300 Sobic002G108300 Sobic005G174200--Sobic002G108300 Sobic005G174200--Sobic003G211600 Sobic005G174200--Sobic001G495700 Sobic009G058300 Sobic009G058300 Sobic005G174200--Sobic009G058300 Sobic005G174200--Sobic005G033600 Sobic005G174200--Sobic008G184100 Sobic005G174200--Sobic003G091500 Sobic005G226800 Sobic005G226800 Sobic003G211600--Sobic005G226800 Sobic007G066200 Sobic007G066200 Sobic003G211600--Sobic007G066200 Sobic003G211600--Sobic001G374600 Sobic003G211600--Sobic005G174200 Sobic009G062300 Sobic009G062300 Sobic003G211600--Sobic009G062300 Sobic003G211600--Sobic007G032500 Sobic003G211600--Sobic005G173900 Sobic003G211600--Sobic001G495700 Sobic003G211600--Sobic005G033600 Sobic007G032500--Sobic005G174200 Sobic007G032500--Sobic009G058300 Sobic007G032500--Sobic002G108300 Sobic007G032500--Sobic001G495700 Sobic002G015500 Sobic002G015500 Sobic007G032500--Sobic002G015500 Sobic008G088900 Sobic008G088900 Sobic007G032500--Sobic008G088900 Sobic002G015400 Sobic002G015400 Sobic007G032500--Sobic002G015400 Sobic010G133150 Sobic010G133150 Sobic007G032500--Sobic010G133150 Sobic007G032500--Sobic001G374600 Sobic007G040000 Sobic007G040000 Sobic005G173900--Sobic007G040000 Sobic005G174500 Sobic005G174500 Sobic005G173900--Sobic005G174500 Sobic009G090250 Sobic009G090250 Sobic005G173900--Sobic009G090250 Sobic001G246400 Sobic001G246400 Sobic005G173900--Sobic001G246400 Sobic005G173900--Sobic003G211600 Sobic005G173900--Sobic001G374600 Sobic002G302200 Sobic002G302200 Sobic005G173900--Sobic002G302200 Sobic001G270600 Sobic001G270600 Sobic005G173900--Sobic001G270600 Sobic005G173900--Sobic006G070830 Sobic005G033600--Sobic005G174200 Sobic002G267700 Sobic002G267700 Sobic005G033600--Sobic002G267700 Sobic005G033600--Sobic007G032500 Sobic009G139500 Sobic009G139500 Sobic005G033600--Sobic009G139500 Sobic005G033600--Sobic003G211600 Sobic005G033600--Sobic006G070830 Sobic005G033600--Sobic001G374600 Sobic005G033600--Sobic002G015400 Sobic005G033600--Sobic003G091500 Sobic006G070830--Sobic005G174200 Sobic006G070830--Sobic002G267700 Sobic006G070830--Sobic005G173900 Sobic006G070830--Sobic005G174500 Sobic006G070830--Sobic005G033600 Sobic006G070830--Sobic008G184100 Sobic006G070830--Sobic003G091500 Sobic006G070830--Sobic001G374600 Sobic006G070830--Sobic007G040000 Sobic001G495700--Sobic002G015500 Sobic001G495700--Sobic010G133150 Sobic002G097100 Sobic002G097100 Sobic001G495700--Sobic002G097100 Sobic001G495700--Sobic007G032500 Sobic001G495700--Sobic005G174200 Sobic001G511400 Sobic001G511400 Sobic001G495700--Sobic001G511400 Sobic001G495700--Sobic002G015400 Sobic001G495700--Sobic009G058300 Sobic007G199500 Sobic007G199500 Sobic001G495700--Sobic007G199500 Sobic003G091500--Sobic008G184100 Sobic003G091500--Sobic008G088900 Sobic003G091500--Sobic002G108300 Sobic002G007700 Sobic002G007700 Sobic003G091500--Sobic002G007700 Sobic004G171600 Sobic004G171600 Sobic003G091500--Sobic004G171600 Sobic003G207100 Sobic003G207100 Sobic003G091500--Sobic003G207100 Sobic001G233600 Sobic001G233600 Sobic003G091500--Sobic001G233600 Sobic008G031400 Sobic008G031400 Sobic003G091500--Sobic008G031400 Sobic005G077900 Sobic005G077900 Sobic003G091500--Sobic005G077900 Sobic008G184100--Sobic003G091500 Sobic008G184100--Sobic008G088900 Sobic008G184100--Sobic002G108300 Sobic008G184100--Sobic002G007700 Sobic008G184100--Sobic004G171600 Sobic008G184100--Sobic008G031400 Sobic008G184100--Sobic001G233600 Sobic008G184100--Sobic003G207100 Sobic005G174000 Sobic005G174000 Sobic008G184100--Sobic005G174000
Octagon: transcription factors


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