Gene annotation
Transcriptome id Sobic.007G032500.1
Synonym FIE1, Sb07g002820, FIS3, FIE
Functional annotation WD domain, G-beta repeat domain containing protein, expressed
UniProt C5YN03 , Q7FS95
Pfam PF00400
Panther DB PTHR10253
NCBI CDD KOG1034; Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily
KEGG Orthology K11462; polycomb protein EED
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G20740 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os08g04270.2 : WD domain, G-beta repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a030161 , Zm00025a055278
Brachypodium PNT66596 , PNT66827 , KQJ94988 , KQJ94989 , KQJ94994 , KQJ95478
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G032500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G174200 - -
2 Sobic.009G058300 expressed protein -
3 Sobic.002G108300 expressed protein -
4 Sobic.001G495700 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
5 Sobic.002G015500 OsFBD13 - F-box and FBD domain containing protein, expressed -
6 Sobic.008G088900 hypothetical protein -
7 Sobic.002G015400 OsFBD13 - F-box and FBD domain containing protein, expressed -
8 Sobic.010G133150 - -
9 Sobic.001G374600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@desiccation-related protein PCC13-62 precursor, putative, expressed -
10 Sobic.003G091500 expressed protein -
11 Sobic.008G184100 aspartic proteinase, putative, expressed -
12 Sobic.003G211600 - -
13 Sobic.001G511400 BES1/BZR1 homolog protein, putative, expressed -
14 Sobic.001G284700 - -
15 Sobic.002G097100 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
16 Sobic.005G033600 heavy-metal-associated domain-containing protein, putative, expressed -
17 Sobic.005G147500 - -
18 Sobic.002G172100 receptor-like protein kinase 5 precursor, putative, expressed -
19 Sobic.008G159300 KUN1 - Kunitz-type trypsin inhibitor precursor, expressed -
20 Sobic.008G031400 OsSub63 - Putative Subtilisin homologue, expressed -


Gene co-expression network
sample Sobic007G032500 Sobic007G032500 Sobic005G174200 Sobic005G174200 Sobic007G032500--Sobic005G174200 Sobic009G058300 Sobic009G058300 Sobic007G032500--Sobic009G058300 Sobic002G108300 Sobic002G108300 Sobic007G032500--Sobic002G108300 Sobic001G495700 Sobic001G495700 Sobic007G032500--Sobic001G495700 Sobic002G015500 Sobic002G015500 Sobic007G032500--Sobic002G015500 Sobic008G088900 Sobic008G088900 Sobic007G032500--Sobic008G088900 Sobic002G015400 Sobic002G015400 Sobic007G032500--Sobic002G015400 Sobic010G133150 Sobic010G133150 Sobic007G032500--Sobic010G133150 Sobic001G374600 Sobic001G374600 Sobic007G032500--Sobic001G374600 Sobic005G174200--Sobic007G032500 Sobic005G174200--Sobic001G374600 Sobic005G174200--Sobic002G108300 Sobic003G211600 Sobic003G211600 Sobic005G174200--Sobic003G211600 Sobic005G174200--Sobic001G495700 Sobic005G174200--Sobic009G058300 Sobic005G033600 Sobic005G033600 Sobic005G174200--Sobic005G033600 Sobic008G184100 Sobic008G184100 Sobic005G174200--Sobic008G184100 Sobic003G091500 Sobic003G091500 Sobic005G174200--Sobic003G091500 Sobic009G058300--Sobic002G108300 Sobic001G284700 Sobic001G284700 Sobic009G058300--Sobic001G284700 Sobic002G172100 Sobic002G172100 Sobic009G058300--Sobic002G172100 Sobic005G147500 Sobic005G147500 Sobic009G058300--Sobic005G147500 Sobic009G058300--Sobic007G032500 Sobic006G264800 Sobic006G264800 Sobic009G058300--Sobic006G264800 Sobic009G058300--Sobic008G088900 Sobic001G511400 Sobic001G511400 Sobic009G058300--Sobic001G511400 Sobic009G058300--Sobic002G015400 Sobic002G108300--Sobic008G088900 Sobic002G108300--Sobic003G091500 Sobic002G108300--Sobic008G184100 Sobic002G108300--Sobic009G058300 Sobic001G489075 Sobic001G489075 Sobic002G108300--Sobic001G489075 Sobic002G108300--Sobic007G032500 Sobic004G171600 Sobic004G171600 Sobic002G108300--Sobic004G171600 Sobic005G146966 Sobic005G146966 Sobic002G108300--Sobic005G146966 Sobic005G174000 Sobic005G174000 Sobic002G108300--Sobic005G174000 Sobic001G495700--Sobic002G015500 Sobic001G495700--Sobic010G133150 Sobic002G097100 Sobic002G097100 Sobic001G495700--Sobic002G097100 Sobic001G495700--Sobic007G032500 Sobic001G495700--Sobic005G174200 Sobic001G495700--Sobic001G511400 Sobic001G495700--Sobic002G015400 Sobic001G495700--Sobic009G058300 Sobic007G199500 Sobic007G199500 Sobic001G495700--Sobic007G199500 Sobic002G015500--Sobic002G097100 Sobic002G015500--Sobic001G495700 Sobic002G015500--Sobic010G133150 Sobic009G057100 Sobic009G057100 Sobic002G015500--Sobic009G057100 Sobic002G015500--Sobic007G032500 Sobic004G071100 Sobic004G071100 Sobic002G015500--Sobic004G071100 Sobic002G015500--Sobic001G511400 Sobic002G015500--Sobic005G147500 Sobic002G015500--Sobic009G058300 Sobic008G088900--Sobic002G108300 Sobic008G088900--Sobic003G091500 Sobic008G088900--Sobic008G184100 Sobic008G088900--Sobic004G171600 Sobic008G088900--Sobic001G489075 Sobic008G088900--Sobic005G174000 Sobic005G077900 Sobic005G077900 Sobic008G088900--Sobic005G077900 Sobic002G007700 Sobic002G007700 Sobic008G088900--Sobic002G007700 Sobic008G088900--Sobic005G146966 Sobic008G159300 Sobic008G159300 Sobic002G015400--Sobic008G159300 Sobic002G015400--Sobic001G511400 Sobic003G266100 Sobic003G266100 Sobic002G015400--Sobic003G266100 Sobic002G172200 Sobic002G172200 Sobic002G015400--Sobic002G172200 Sobic002G015400--Sobic002G172100 Sobic002G058900 Sobic002G058900 Sobic002G015400--Sobic002G058900 Sobic002G015400--Sobic009G058300 Sobic002G015400--Sobic001G495700 Sobic002G059500 Sobic002G059500 Sobic002G015400--Sobic002G059500 Sobic010G133150--Sobic001G495700 Sobic010G133150--Sobic002G097100 Sobic010G133150--Sobic002G015500 Sobic010G133150--Sobic007G032500 Sobic003G319050 Sobic003G319050 Sobic010G133150--Sobic003G319050 Sobic010G133150--Sobic005G174200 Sobic010G133150--Sobic009G057100 Sobic010G133150--Sobic001G511400 Sobic010G133150--Sobic007G199500 Sobic001G374600--Sobic005G174200 Sobic001G374600--Sobic003G211600 Sobic001G374600--Sobic007G032500 Sobic005G173900 Sobic005G173900 Sobic001G374600--Sobic005G173900 Sobic001G374600--Sobic005G033600 Sobic006G070830 Sobic006G070830 Sobic001G374600--Sobic006G070830 Sobic001G374600--Sobic001G495700 Sobic001G374600--Sobic003G091500 Sobic001G374600--Sobic008G184100
Octagon: transcription factors


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