Gene annotation
Transcriptome id Sobic.001G438000.1
Synonym HSP21, Sb01g041180,
Functional annotation expressed high in San Chi San (an efficient nitrogen user) (PubMedID : 28697783)
SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Up-reguralion under heat (PubMedID : 24916767)
HSP21 Heat shock protein 21( (PubMedID : 26759170,(PubMedID : 24597475)
hsp20/alpha crystallin family protein, putative, expressed
UniProt C5WQZ1
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF167
NCBI CDD KOG0710; Molecular chaperone (small heat-shock protein Hsp26/Hsp42)
KEGG Orthology K13993; HSP20 family protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G27670 : heat shock protein 21
RAP-DB (Rice) LOC_Os03g14180.1 : hsp20/alpha crystallin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a001552
Brachypodium KQK22619
Barley HORVU4Hr1G063350.1
Wheat TraesCS4D02G226000 , TraesCS4A02G068200 , TraesCS4B02G225400 , TraesCS4A02G068300
Populus -


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cDNA sequences
Sobic.001G438000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G102066 - -
2 Sobic.010G104300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
3 Sobic.004G263100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
4 Sobic.001G065900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.002G102132 - -
6 Sobic.004G092800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
7 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
8 Sobic.007G159100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@tetraspanin family protein, putative, expressed -
9 Sobic.002G100832 - -
10 Sobic.001G381400 expressed protein -
11 Sobic.004G165800 zinc finger family protein, putative, expressed -
12 Sobic.002G090100 - -
13 Sobic.002G090100 - -
14 Sobic.002G090100 - -
15 Sobic.002G090100 - -
16 Sobic.002G090100 - -
17 Sobic.002G090100 - -
18 Sobic.002G239450 - -
19 Sobic.004G251800 leaf senescence related protein, putative, expressed -
20 Sobic.004G094900 expressed protein -


Gene co-expression network
sample Sobic001G438000 Sobic001G438000 Sobic002G102066 Sobic002G102066 Sobic001G438000--Sobic002G102066 Sobic010G104300 Sobic010G104300 Sobic001G438000--Sobic010G104300 Sobic004G263100 Sobic004G263100 Sobic001G438000--Sobic004G263100 Sobic001G065900 Sobic001G065900 Sobic001G438000--Sobic001G065900 Sobic002G102132 Sobic002G102132 Sobic001G438000--Sobic002G102132 Sobic004G092800 Sobic004G092800 Sobic001G438000--Sobic004G092800 Sobic002G388800 Sobic002G388800 Sobic001G438000--Sobic002G388800 Sobic007G159100 Sobic007G159100 Sobic001G438000--Sobic007G159100 Sobic002G100832 Sobic002G100832 Sobic001G438000--Sobic002G100832 Sobic002G102066--Sobic001G438000 Sobic006G057500 Sobic006G057500 Sobic002G102066--Sobic006G057500 Sobic002G102066--Sobic002G100832 Sobic007G169500 Sobic007G169500 Sobic002G102066--Sobic007G169500 Sobic002G102066--Sobic002G102132 Sobic003G303400 Sobic003G303400 Sobic002G102066--Sobic003G303400 Sobic008G054150 Sobic008G054150 Sobic002G102066--Sobic008G054150 Sobic004G165800 Sobic004G165800 Sobic002G102066--Sobic004G165800 Sobic005G120201 Sobic005G120201 Sobic002G102066--Sobic005G120201 Sobic009G194400 Sobic009G194400 Sobic010G104300--Sobic009G194400 Sobic001G495132 Sobic001G495132 Sobic010G104300--Sobic001G495132 Sobic010G104300--Sobic002G388800 Sobic010G104300--Sobic004G092800 Sobic002G269100 Sobic002G269100 Sobic010G104300--Sobic002G269100 Sobic001G425500 Sobic001G425500 Sobic010G104300--Sobic001G425500 Sobic004G295600 Sobic004G295600 Sobic010G104300--Sobic004G295600 Sobic001G338600 Sobic001G338600 Sobic010G104300--Sobic001G338600 Sobic001G440200 Sobic001G440200 Sobic010G104300--Sobic001G440200 Sobic004G263100--Sobic002G102132 Sobic004G263100--Sobic007G159100 Sobic004G263100--Sobic001G065900 Sobic004G263100--Sobic002G100832 Sobic004G263100--Sobic002G388800 Sobic004G263100--Sobic004G165800 Sobic001G381400 Sobic001G381400 Sobic004G263100--Sobic001G381400 Sobic004G263100--Sobic006G057500 Sobic002G090100 Sobic002G090100 Sobic004G263100--Sobic002G090100 Sobic001G065900--Sobic004G263100 Sobic001G065900--Sobic004G165800 Sobic001G065900--Sobic002G100832 Sobic001G065900--Sobic002G102132 Sobic001G065900--Sobic004G092800 Sobic001G065900--Sobic006G057500 Sobic004G251800 Sobic004G251800 Sobic001G065900--Sobic004G251800 Sobic001G065900--Sobic002G388800 Sobic004G341000 Sobic004G341000 Sobic001G065900--Sobic004G341000 Sobic002G102132--Sobic007G159100 Sobic002G102132--Sobic004G263100 Sobic002G102132--Sobic002G090100 Sobic002G102132--Sobic004G165800 Sobic001G232500 Sobic001G232500 Sobic004G092800--Sobic001G232500 Sobic004G092800--Sobic001G065900 Sobic003G370600 Sobic003G370600 Sobic004G092800--Sobic003G370600 Sobic004G092800--Sobic002G388800 Sobic004G092800--Sobic001G425500 Sobic004G092800--Sobic004G263100 Sobic004G092800--Sobic009G194400 Sobic002G369301 Sobic002G369301 Sobic004G092800--Sobic002G369301 Sobic006G170000 Sobic006G170000 Sobic004G092800--Sobic006G170000 Sobic002G388800--Sobic004G263100 Sobic005G171001 Sobic005G171001 Sobic002G388800--Sobic005G171001 Sobic002G388800--Sobic004G092800 Sobic002G388800--Sobic001G065900 Sobic002G388800--Sobic001G381400 Sobic002G390000 Sobic002G390000 Sobic002G388800--Sobic002G390000 Sobic002G388800--Sobic002G102132 Sobic002G388800--Sobic007G159100 Sobic002G388800--Sobic004G251800 Sobic007G159100--Sobic002G102132 Sobic007G159100--Sobic004G263100 Sobic007G159100--Sobic002G090100 Sobic007G159100--Sobic001G381400 Sobic002G100832--Sobic006G057500 Sobic002G100832--Sobic004G263100 Sobic002G100832--Sobic004G165800 Sobic002G100832--Sobic001G065900 Sobic002G100832--Sobic002G102132 Sobic002G100832--Sobic004G341000 Sobic002G100832--Sobic007G159100 Sobic002G100832--Sobic009G194400 Sobic002G100832--Sobic001G425500
Octagon: transcription factors


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