Gene annotation
Transcriptome id Sobic.002G102066.1,Sobic.002G102066.2
Synonym -
Functional annotation -
UniProt A0A1W0W360 , A0A1W0W346
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G438000 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@HSP21 Heat shock protein 21("PubMedID : 26759170,PubMedID : 24597475")@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
2 Sobic.006G057500 flavonol sulfotransferase, putative, expressed -
3 Sobic.002G100832 - -
4 Sobic.007G169500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@Ribosomal protein L1p/L10e family("PubMedID : 26759170,PubMedID : 24597475")@L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
5 Sobic.002G102132 - -
6 Sobic.003G303400 CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
7 Sobic.008G054150 - -
8 Sobic.004G165800 zinc finger family protein, putative, expressed -
9 Sobic.005G120201 - -
10 Sobic.004G263100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
11 Sobic.007G159100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@tetraspanin family protein, putative, expressed -
12 Sobic.004G115500 expressed protein -
13 Sobic.004G341000 OsFBX66 - F-box domain containing protein, expressed -
14 Sobic.001G065900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.009G009400 expressed protein -
16 Sobic.006G091800 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
17 Sobic.009G257400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
18 Sobic.006G092600 MLO domain containing protein, putative, expressed -
19 Sobic.010G179400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed K08237: hydroquinone glucosyltransferase
20 Sobic.009G043700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic002G102066 Sobic002G102066 Sobic001G438000 Sobic001G438000 Sobic002G102066--Sobic001G438000 Sobic006G057500 Sobic006G057500 Sobic002G102066--Sobic006G057500 Sobic002G100832 Sobic002G100832 Sobic002G102066--Sobic002G100832 Sobic007G169500 Sobic007G169500 Sobic002G102066--Sobic007G169500 Sobic002G102132 Sobic002G102132 Sobic002G102066--Sobic002G102132 Sobic003G303400 Sobic003G303400 Sobic002G102066--Sobic003G303400 Sobic008G054150 Sobic008G054150 Sobic002G102066--Sobic008G054150 Sobic004G165800 Sobic004G165800 Sobic002G102066--Sobic004G165800 Sobic005G120201 Sobic005G120201 Sobic002G102066--Sobic005G120201 Sobic001G438000--Sobic002G102066 Sobic010G104300 Sobic010G104300 Sobic001G438000--Sobic010G104300 Sobic004G263100 Sobic004G263100 Sobic001G438000--Sobic004G263100 Sobic001G065900 Sobic001G065900 Sobic001G438000--Sobic001G065900 Sobic001G438000--Sobic002G102132 Sobic004G092800 Sobic004G092800 Sobic001G438000--Sobic004G092800 Sobic002G388800 Sobic002G388800 Sobic001G438000--Sobic002G388800 Sobic007G159100 Sobic007G159100 Sobic001G438000--Sobic007G159100 Sobic001G438000--Sobic002G100832 Sobic006G057500--Sobic002G100832 Sobic006G057500--Sobic004G165800 Sobic004G341000 Sobic004G341000 Sobic006G057500--Sobic004G341000 Sobic006G057500--Sobic004G263100 Sobic006G057500--Sobic001G065900 Sobic006G057500--Sobic002G102132 Sobic006G057500--Sobic007G159100 Sobic006G057500--Sobic007G169500 Sobic006G057500--Sobic008G054150 Sobic002G100832--Sobic006G057500 Sobic002G100832--Sobic004G263100 Sobic002G100832--Sobic004G165800 Sobic002G100832--Sobic001G065900 Sobic002G100832--Sobic002G102132 Sobic002G100832--Sobic004G341000 Sobic002G100832--Sobic007G159100 Sobic009G194400 Sobic009G194400 Sobic002G100832--Sobic009G194400 Sobic001G425500 Sobic001G425500 Sobic002G100832--Sobic001G425500 Sobic007G169500--Sobic008G054150 Sobic009G009400 Sobic009G009400 Sobic007G169500--Sobic009G009400 Sobic001G343601 Sobic001G343601 Sobic007G169500--Sobic001G343601 Sobic004G115500 Sobic004G115500 Sobic007G169500--Sobic004G115500 Sobic001G260000 Sobic001G260000 Sobic007G169500--Sobic001G260000 Sobic001G357100 Sobic001G357100 Sobic007G169500--Sobic001G357100 Sobic007G169500--Sobic006G057500 Sobic009G043700 Sobic009G043700 Sobic007G169500--Sobic009G043700 Sobic002G146100 Sobic002G146100 Sobic007G169500--Sobic002G146100 Sobic002G102132--Sobic007G159100 Sobic002G102132--Sobic004G263100 Sobic002G090100 Sobic002G090100 Sobic002G102132--Sobic002G090100 Sobic002G102132--Sobic004G165800 Sobic003G303400--Sobic002G100832 Sobic003G303400--Sobic006G057500 Sobic003G303400--Sobic002G102132 Sobic003G303400--Sobic004G263100 Sobic003G303400--Sobic007G159100 Sobic003G303400--Sobic004G165800 Sobic010G179400 Sobic010G179400 Sobic003G303400--Sobic010G179400 Sobic002G238600 Sobic002G238600 Sobic003G303400--Sobic002G238600 Sobic001G102150 Sobic001G102150 Sobic003G303400--Sobic001G102150 Sobic008G054150--Sobic007G169500 Sobic008G054150--Sobic001G260000 Sobic008G054150--Sobic001G343601 Sobic008G054150--Sobic009G009400 Sobic008G054150--Sobic004G115500 Sobic008G054150--Sobic002G146100 Sobic008G054150--Sobic006G057500 Sobic008G054150--Sobic004G341000 Sobic004G311750 Sobic004G311750 Sobic008G054150--Sobic004G311750 Sobic004G165800--Sobic006G057500 Sobic004G165800--Sobic007G159100 Sobic004G165800--Sobic001G065900 Sobic004G165800--Sobic002G102132 Sobic004G165800--Sobic002G100832 Sobic004G165800--Sobic004G263100 Sobic001G327500 Sobic001G327500 Sobic004G165800--Sobic001G327500 Sobic001G381400 Sobic001G381400 Sobic004G165800--Sobic001G381400 Sobic004G165800--Sobic002G090100 Sobic005G120201--Sobic007G169500 Sobic005G120201--Sobic008G054150 Sobic005G120201--Sobic004G115500 Sobic005G120201--Sobic009G009400 Sobic005G120201--Sobic006G057500 Sobic005G120201--Sobic002G100832 Sobic005G120201--Sobic001G357100 Sobic005G120201--Sobic009G043700 Sobic005G120201--Sobic001G343601
Octagon: transcription factors


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