Gene annotation
Transcriptome id Sobic.005G120201.1
Synonym -
Functional annotation -
UniProt C5Y4A3
Pfam PF14303
Panther DB PTHR11260 PTHR11260:SF248
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47680 : DNA binding
RAP-DB (Rice) LOC_Os10g24040.1 : transposon protein, putative, Pong sub-class, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G169500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@Ribosomal protein L1p/L10e family("PubMedID : 26759170,PubMedID : 24597475")@L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
2 Sobic.008G054150 - -
3 Sobic.004G115500 expressed protein -
4 Sobic.009G009400 expressed protein -
5 Sobic.006G057500 flavonol sulfotransferase, putative, expressed -
6 Sobic.002G100832 - -
7 Sobic.001G357100 ZOS9-11 - C2H2 zinc finger protein, expressed -
8 Sobic.009G043700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.001G343601 - K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
10 Sobic.010G179400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed K08237: hydroquinone glucosyltransferase
11 Sobic.006G092600 MLO domain containing protein, putative, expressed -
12 Sobic.008G068166 - -
13 Sobic.003G303400 CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
14 Sobic.004G341000 OsFBX66 - F-box domain containing protein, expressed -
15 Sobic.006G091800 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
16 Sobic.001G260000 SAP domain containing protein, expressed -
17 Sobic.004G165800 zinc finger family protein, putative, expressed -
18 Sobic.002G102132 - -
19 Sobic.002G146100 - -
20 Sobic.004G263100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein


Gene co-expression network
sample Sobic005G120201 Sobic005G120201 Sobic007G169500 Sobic007G169500 Sobic005G120201--Sobic007G169500 Sobic008G054150 Sobic008G054150 Sobic005G120201--Sobic008G054150 Sobic004G115500 Sobic004G115500 Sobic005G120201--Sobic004G115500 Sobic009G009400 Sobic009G009400 Sobic005G120201--Sobic009G009400 Sobic006G057500 Sobic006G057500 Sobic005G120201--Sobic006G057500 Sobic002G100832 Sobic002G100832 Sobic005G120201--Sobic002G100832 Sobic001G357100 Sobic001G357100 Sobic005G120201--Sobic001G357100 Sobic009G043700 Sobic009G043700 Sobic005G120201--Sobic009G043700 Sobic001G343601 Sobic001G343601 Sobic005G120201--Sobic001G343601 Sobic007G169500--Sobic008G054150 Sobic007G169500--Sobic009G009400 Sobic007G169500--Sobic001G343601 Sobic007G169500--Sobic004G115500 Sobic001G260000 Sobic001G260000 Sobic007G169500--Sobic001G260000 Sobic007G169500--Sobic001G357100 Sobic007G169500--Sobic006G057500 Sobic007G169500--Sobic009G043700 Sobic002G146100 Sobic002G146100 Sobic007G169500--Sobic002G146100 Sobic008G054150--Sobic007G169500 Sobic008G054150--Sobic001G260000 Sobic008G054150--Sobic001G343601 Sobic008G054150--Sobic009G009400 Sobic008G054150--Sobic004G115500 Sobic008G054150--Sobic002G146100 Sobic008G054150--Sobic006G057500 Sobic004G341000 Sobic004G341000 Sobic008G054150--Sobic004G341000 Sobic004G311750 Sobic004G311750 Sobic008G054150--Sobic004G311750 Sobic004G115500--Sobic001G357100 Sobic004G115500--Sobic007G169500 Sobic004G115500--Sobic008G054150 Sobic004G115500--Sobic009G009400 Sobic004G115500--Sobic001G343601 Sobic004G115500--Sobic009G043700 Sobic010G084600 Sobic010G084600 Sobic004G115500--Sobic010G084600 Sobic004G115500--Sobic004G341000 Sobic004G037000 Sobic004G037000 Sobic004G115500--Sobic004G037000 Sobic009G009400--Sobic001G343601 Sobic009G009400--Sobic007G169500 Sobic009G009400--Sobic008G054150 Sobic001G342700 Sobic001G342700 Sobic009G009400--Sobic001G342700 Sobic009G009400--Sobic009G043700 Sobic009G009400--Sobic004G115500 Sobic009G009400--Sobic001G260000 Sobic009G009400--Sobic002G146100 Sobic002G182500 Sobic002G182500 Sobic009G009400--Sobic002G182500 Sobic006G057500--Sobic002G100832 Sobic004G165800 Sobic004G165800 Sobic006G057500--Sobic004G165800 Sobic006G057500--Sobic004G341000 Sobic004G263100 Sobic004G263100 Sobic006G057500--Sobic004G263100 Sobic001G065900 Sobic001G065900 Sobic006G057500--Sobic001G065900 Sobic002G102132 Sobic002G102132 Sobic006G057500--Sobic002G102132 Sobic007G159100 Sobic007G159100 Sobic006G057500--Sobic007G159100 Sobic006G057500--Sobic007G169500 Sobic006G057500--Sobic008G054150 Sobic002G100832--Sobic006G057500 Sobic002G100832--Sobic004G263100 Sobic002G100832--Sobic004G165800 Sobic002G100832--Sobic001G065900 Sobic002G100832--Sobic002G102132 Sobic002G100832--Sobic004G341000 Sobic002G100832--Sobic007G159100 Sobic009G194400 Sobic009G194400 Sobic002G100832--Sobic009G194400 Sobic001G425500 Sobic001G425500 Sobic002G100832--Sobic001G425500 Sobic001G357100--Sobic004G115500 Sobic003G307300 Sobic003G307300 Sobic001G357100--Sobic003G307300 Sobic001G357100--Sobic007G169500 Sobic001G357100--Sobic001G343601 Sobic001G357100--Sobic009G009400 Sobic001G279701 Sobic001G279701 Sobic001G357100--Sobic001G279701 Sobic007G155200 Sobic007G155200 Sobic001G357100--Sobic007G155200 Sobic001G357100--Sobic008G054150 Sobic001G357100--Sobic010G084600 Sobic009G043700--Sobic009G009400 Sobic009G043700--Sobic004G115500 Sobic009G043700--Sobic007G169500 Sobic009G043700--Sobic001G343601 Sobic009G043700--Sobic008G054150 Sobic009G043700--Sobic001G357100 Sobic009G043700--Sobic001G342700 Sobic001G495148 Sobic001G495148 Sobic009G043700--Sobic001G495148 Sobic008G068166 Sobic008G068166 Sobic009G043700--Sobic008G068166 Sobic001G343601--Sobic009G009400 Sobic001G343601--Sobic008G054150 Sobic001G343601--Sobic001G342700 Sobic001G343601--Sobic001G260000 Sobic001G343601--Sobic007G169500 Sobic001G343601--Sobic002G146100 Sobic001G343601--Sobic004G115500 Sobic006G033260 Sobic006G033260 Sobic001G343601--Sobic006G033260 Sobic007G158700 Sobic007G158700 Sobic001G343601--Sobic007G158700
Octagon: transcription factors


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