Gene annotation
Transcriptome id Sobic.002G064800.1
Synonym Sb02g005420
Functional annotation peptide transporter PTR2, putative, expressed
UniProt C5XBX9
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF117
NCBI CDD -
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G62680 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os03g48180.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a017093 , Zm00025a004867 , Zm00025a007621
Brachypodium PNT68390 , KQK13743 , KQJ85605
Barley HORVU5Hr1G000800.9 , HORVU5Hr1G000800.8 , HORVU5Hr1G000800.3 , HORVU5Hr1G000800.2 , HORVU5Hr1G000800.1 , HORVU5Hr1G000800.7 , HORVU5Hr1G000800.6 , HORVU5Hr1G000800.5 , HORVU5Hr1G000800.4 , HORVU4Hr1G004460.1 , HORVU4Hr1G004460.3 , HORVU4Hr1G004460.4 , HORVU4Hr1G004460.5 , HORVU4Hr1G004460.6 , HORVU4Hr1G004460.7 , HORVU7Hr1G018540.1 , HORVU7Hr1G018540.3 , HORVU7Hr1G018540.2 , HORVU5Hr1G000800.13 , HORVU5Hr1G000800.12 , HORVU5Hr1G000800.11 , HORVU5Hr1G000800.10 , HORVU5Hr1G000800.14
Wheat TraesCS4D02G026800 , TraesCS4A02G283900 , TraesCS5D02G012500 , TraesCS2D02G044200 , TraesCS2A02G045500 , TraesCS4B02G029600 , TraesCS2B02G057700 , TraesCS5A02G004400 , TraesCS5B02G001100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G212201 - -
2 Sobic.001G376501 - -
3 Sobic.008G191700 - -
4 Sobic.005G206100 cytochrome P450, putative, expressed -
5 Sobic.004G276000 - -
6 Sobic.008G141900 ZOS12-07 - C2H2 zinc finger protein, expressed -
7 Sobic.009G163400 growth regulator related protein, putative, expressed -
8 Sobic.010G211200 ZOS6-06 - C2H2 zinc finger protein, expressed -
9 Sobic.003G275400 B3 DNA binding domain containing protein, expressed -
10 Sobic.009G241900 oleosin, putative, expressed -
11 Sobic.001G257650 - -
12 Sobic.003G427000 early-responsive to dehydration protein-related, putative, expressed -
13 Sobic.004G222150 - -
14 Sobic.009G168200 expressed protein -
15 Sobic.004G298000 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
16 Sobic.001G010500 frigida, putative, expressed -
17 Sobic.008G121501 - -
18 Sobic.006G109650 - -
19 Sobic.003G045450 - -
20 Sobic.008G046000 expressed protein -


Gene co-expression network
sample Sobic002G064800 Sobic002G064800 Sobic005G212201 Sobic005G212201 Sobic002G064800--Sobic005G212201 Sobic001G376501 Sobic001G376501 Sobic002G064800--Sobic001G376501 Sobic008G191700 Sobic008G191700 Sobic002G064800--Sobic008G191700 Sobic005G206100 Sobic005G206100 Sobic002G064800--Sobic005G206100 Sobic004G276000 Sobic004G276000 Sobic002G064800--Sobic004G276000 Sobic008G141900 Sobic008G141900 Sobic002G064800--Sobic008G141900 Sobic009G163400 Sobic009G163400 Sobic002G064800--Sobic009G163400 Sobic010G211200 Sobic010G211200 Sobic002G064800--Sobic010G211200 Sobic003G275400 Sobic003G275400 Sobic002G064800--Sobic003G275400 Sobic005G212201--Sobic002G064800 Sobic005G212201--Sobic008G191700 Sobic005G212201--Sobic001G376501 Sobic005G212201--Sobic005G206100 Sobic005G212201--Sobic010G211200 Sobic005G212201--Sobic008G141900 Sobic005G212201--Sobic004G276000 Sobic009G241900 Sobic009G241900 Sobic005G212201--Sobic009G241900 Sobic004G222150 Sobic004G222150 Sobic005G212201--Sobic004G222150 Sobic001G376501--Sobic002G064800 Sobic001G376501--Sobic009G163400 Sobic001G376501--Sobic008G141900 Sobic001G257650 Sobic001G257650 Sobic001G376501--Sobic001G257650 Sobic008G121501 Sobic008G121501 Sobic001G376501--Sobic008G121501 Sobic001G376501--Sobic005G212201 Sobic001G010500 Sobic001G010500 Sobic001G376501--Sobic001G010500 Sobic001G376501--Sobic004G276000 Sobic001G376501--Sobic003G275400 Sobic008G191700--Sobic009G241900 Sobic008G191700--Sobic002G064800 Sobic008G191700--Sobic010G211200 Sobic003G427000 Sobic003G427000 Sobic008G191700--Sobic003G427000 Sobic008G191700--Sobic005G206100 Sobic008G191700--Sobic005G212201 Sobic008G191700--Sobic004G222150 Sobic008G191700--Sobic004G276000 Sobic008G191700--Sobic003G275400 Sobic005G206100--Sobic008G191700 Sobic005G206100--Sobic002G064800 Sobic005G206100--Sobic009G241900 Sobic005G206100--Sobic005G212201 Sobic005G206100--Sobic001G376501 Sobic005G206100--Sobic010G211200 Sobic005G206100--Sobic003G427000 Sobic005G206100--Sobic004G276000 Sobic005G206100--Sobic003G275400 Sobic004G276000--Sobic002G064800 Sobic004G276000--Sobic005G212201 Sobic004G276000--Sobic001G376501 Sobic004G276000--Sobic008G141900 Sobic004G276000--Sobic009G163400 Sobic004G276000--Sobic008G191700 Sobic004G276000--Sobic005G206100 Sobic004G276000--Sobic004G222150 Sobic004G276000--Sobic010G211200 Sobic008G141900--Sobic009G163400 Sobic008G141900--Sobic001G376501 Sobic008G141900--Sobic002G064800 Sobic008G141900--Sobic005G212201 Sobic009G168200 Sobic009G168200 Sobic008G141900--Sobic009G168200 Sobic008G141900--Sobic004G276000 Sobic008G141900--Sobic001G010500 Sobic008G141900--Sobic003G275400 Sobic008G141900--Sobic001G257650 Sobic009G163400--Sobic001G376501 Sobic009G163400--Sobic008G141900 Sobic009G163400--Sobic001G010500 Sobic009G163400--Sobic008G121501 Sobic002G309100 Sobic002G309100 Sobic009G163400--Sobic002G309100 Sobic009G163400--Sobic002G064800 Sobic009G163400--Sobic001G257650 Sobic009G163400--Sobic003G275400 Sobic009G163400--Sobic009G168200 Sobic010G211200--Sobic004G222150 Sobic010G211200--Sobic009G241900 Sobic010G211200--Sobic008G191700 Sobic010G211200--Sobic003G427000 Sobic010G211200--Sobic005G212201 Sobic010G211200--Sobic002G064800 Sobic010G211200--Sobic005G206100 Sobic003G285900 Sobic003G285900 Sobic010G211200--Sobic003G285900 Sobic001G393101 Sobic001G393101 Sobic010G211200--Sobic001G393101 Sobic003G275400--Sobic009G168200 Sobic003G275400--Sobic009G163400 Sobic003G275400--Sobic001G376501 Sobic003G275400--Sobic002G064800 Sobic003G275400--Sobic008G141900 Sobic003G275400--Sobic008G191700 Sobic003G275400--Sobic008G121501 Sobic001G485500 Sobic001G485500 Sobic003G275400--Sobic001G485500 Sobic003G275400--Sobic005G206100
Octagon: transcription factors


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