Gene annotation
Transcriptome id Sobic.002G067500.1
Synonym Sb02g005660, AATP1
Functional annotation ATPase, putative, expressed
UniProt C5XCI5
Pfam PF00004 PF14363
Panther DB PTHR23070 PTHR23070:SF40
NCBI CDD -
KEGG Orthology K08900; mitochondrial chaperone BCS1
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT5G40010 : AAA-ATPase 1
RAP-DB (Rice) LOC_Os07g09490.1 : ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a018315 , Zm00025a016039 , Zm00025a045292 , Zm00025a004879 , Zm00025a004881 , Zm00025a008606
Brachypodium KQK15981 , KQJ90448 , KQJ85588 , KQK20482 , KQK20481 , KQJ85593 , KQJ85594 , PNT76854 , PNT76855 , PNT76856 , PNT76857 , KQK17345 , KQJ98547 , KQJ90344 , KQK20476 , KQK20474 , KQK20475
Barley HORVU5Hr1G000640.9 , HORVU5Hr1G000640.8 , HORVU5Hr1G000640.1 , HORVU5Hr1G000640.3 , HORVU5Hr1G000640.5 , HORVU5Hr1G000640.4 , HORVU5Hr1G000640.7 , HORVU5Hr1G000640.6 , HORVU7Hr1G098240.1 , HORVU3Hr1G117690.10 , HORVU1Hr1G063390.3 , HORVU3Hr1G114150.1 , HORVU5Hr1G066780.1 , HORVU5Hr1G066780.2 , HORVU3Hr1G114150.2 , HORVU3Hr1G117690.3 , HORVU3Hr1G117690.2 , HORVU3Hr1G117690.1 , HORVU3Hr1G117690.7 , HORVU3Hr1G117690.6 , HORVU3Hr1G117690.5 , HORVU3Hr1G117690.4 , HORVU3Hr1G117690.9 , HORVU3Hr1G117690.8 , HORVU3Hr1G086670.1 , HORVU3Hr1G086670.2 , HORVU3Hr1G086670.3 , HORVU3Hr1G086670.4 , HORVU3Hr1G086670.5 , HORVU6Hr1G021770.3 , HORVU6Hr1G021770.2 , HORVU6Hr1G021770.1 , HORVU6Hr1G021770.4 , HORVU1Hr1G063390.4 , HORVU1Hr1G063390.5 , HORVU1Hr1G063390.1 , HORVU1Hr1G063390.2 , HORVU5Hr1G107410.2 , HORVU5Hr1G107410.3 , HORVU5Hr1G107410.4 , HORVU7Hr1G098220.4 , HORVU7Hr1G098220.5 , HORVU7Hr1G098220.6 , HORVU7Hr1G098220.1 , HORVU7Hr1G098220.2 , HORVU7Hr1G098220.3 , HORVU5Hr1G000650.1 , HORVU6Hr1G093350.1 , HORVU7Hr1G098210.1
Wheat TraesCS2A02G584000 , TraesCS3A02G357100 , TraesCS3B02G389700 , TraesCS3D02G350900 , TraesCS7D02G502900 , TraesCS3D02G351000 , TraesCS2A02G221500 , TraesCS4A02G384300 , TraesCS3A02G356800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G215700 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL10 - SBP-box gene family member, expressed -
2 Sobic.004G062100 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL5 - SBP-box gene family member, expressed -
3 Sobic.002G251200 dihydroflavonol-4-reductase, putative, expressed -
4 Sobic.010G053300 expressed protein -
5 Sobic.009G075000 expressed protein -
6 Sobic.007G206000 dihydroflavonol-4-reductase, putative, expressed -
7 Sobic.005G042200 homeobox domain containing protein, expressed -
8 Sobic.010G062200 expressed protein -
9 Sobic.003G088200 dihydroflavonol-4-reductase, putative, expressed -
10 Sobic.005G226500 thaumatin family domain containing protein, expressed -
11 Sobic.003G016000 LTPL18 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.010G259400 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
13 Sobic.007G029900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
14 Sobic.001G472400 pumilio domain-containing protein PPD1, putative, expressed -
15 Sobic.003G263800 LTPL150 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.002G427550 - -
17 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
18 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
19 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
20 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic002G067500 Sobic002G067500 Sobic010G215700 Sobic010G215700 Sobic002G067500--Sobic010G215700 Sobic004G062100 Sobic004G062100 Sobic002G067500--Sobic004G062100 Sobic002G251200 Sobic002G251200 Sobic002G067500--Sobic002G251200 Sobic010G053300 Sobic010G053300 Sobic002G067500--Sobic010G053300 Sobic009G075000 Sobic009G075000 Sobic002G067500--Sobic009G075000 Sobic007G206000 Sobic007G206000 Sobic002G067500--Sobic007G206000 Sobic005G042200 Sobic005G042200 Sobic002G067500--Sobic005G042200 Sobic010G062200 Sobic010G062200 Sobic002G067500--Sobic010G062200 Sobic003G088200 Sobic003G088200 Sobic002G067500--Sobic003G088200 Sobic010G215700--Sobic002G251200 Sobic005G226500 Sobic005G226500 Sobic010G215700--Sobic005G226500 Sobic001G334501 Sobic001G334501 Sobic010G215700--Sobic001G334501 Sobic002G399600 Sobic002G399600 Sobic010G215700--Sobic002G399600 Sobic007G037400 Sobic007G037400 Sobic010G215700--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic010G215700--Sobic007G107500 Sobic006G006900 Sobic006G006900 Sobic010G215700--Sobic006G006900 Sobic002G270400 Sobic002G270400 Sobic010G215700--Sobic002G270400 Sobic007G098600 Sobic007G098600 Sobic010G215700--Sobic007G098600 Sobic004G062100--Sobic010G215700 Sobic001G438500 Sobic001G438500 Sobic004G062100--Sobic001G438500 Sobic004G062100--Sobic002G251200 Sobic004G062100--Sobic001G334501 Sobic001G438400 Sobic001G438400 Sobic004G062100--Sobic001G438400 Sobic006G267400 Sobic006G267400 Sobic004G062100--Sobic006G267400 Sobic005G089700 Sobic005G089700 Sobic004G062100--Sobic005G089700 Sobic004G062100--Sobic007G037400 Sobic004G062100--Sobic006G006900 Sobic002G251200--Sobic007G098600 Sobic001G133200 Sobic001G133200 Sobic002G251200--Sobic001G133200 Sobic010G053300--Sobic003G088200 Sobic003G016000 Sobic003G016000 Sobic010G053300--Sobic003G016000 Sobic003G263800 Sobic003G263800 Sobic010G053300--Sobic003G263800 Sobic002G427550 Sobic002G427550 Sobic010G053300--Sobic002G427550 Sobic010G053300--Sobic001G133200 Sobic010G259400 Sobic010G259400 Sobic009G075000--Sobic010G259400 Sobic009G075000--Sobic003G016000 Sobic009G075000--Sobic003G088200 Sobic009G074900 Sobic009G074900 Sobic009G075000--Sobic009G074900 Sobic009G075000--Sobic003G263800 Sobic009G075000--Sobic001G133200 Sobic003G038700 Sobic003G038700 Sobic007G206000--Sobic003G038700 Sobic007G206000--Sobic005G226500 Sobic002G410600 Sobic002G410600 Sobic007G206000--Sobic002G410600 Sobic010G236000 Sobic010G236000 Sobic007G206000--Sobic010G236000 Sobic008G032400 Sobic008G032400 Sobic007G206000--Sobic008G032400 Sobic007G206000--Sobic006G006900 Sobic007G206000--Sobic007G098600 Sobic007G206000--Sobic007G037400 Sobic007G206000--Sobic007G107500 Sobic005G042200--Sobic010G215700 Sobic006G151800 Sobic006G151800 Sobic005G042200--Sobic006G151800 Sobic002G380800 Sobic002G380800 Sobic005G042200--Sobic002G380800 Sobic005G042200--Sobic002G410600 Sobic005G042200--Sobic003G038700 Sobic005G042200--Sobic001G334501 Sobic003G038800 Sobic003G038800 Sobic005G042200--Sobic003G038800 Sobic005G042200--Sobic002G251200 Sobic009G046000 Sobic009G046000 Sobic005G042200--Sobic009G046000 Sobic010G062200--Sobic010G259400 Sobic010G062200--Sobic009G075000 Sobic010G062200--Sobic009G074900 Sobic010G062200--Sobic010G053300 Sobic010G062200--Sobic003G088200 Sobic010G062200--Sobic003G016000 Sobic010G062200--Sobic003G263800 Sobic010G062200--Sobic008G032400 Sobic010G062200--Sobic002G427550 Sobic003G088200--Sobic003G263800 Sobic003G088200--Sobic002G427550 Sobic003G088200--Sobic001G133200
Octagon: transcription factors


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