Gene annotation
Transcriptome id Sobic.002G099866.1
Synonym -
Functional annotation -
UniProt A0A1W0W387
Pfam -
Panther DB PTHR33186 PTHR33186:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g37670.1 : OsFBX15 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G266600 - K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
2 Sobic.001G509100 expressed protein -
3 Sobic.009G132400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@microtubule associated protein, putative, expressed -
4 Sobic.001G264600 - -
5 Sobic.003G167200 - -
6 Sobic.001G261529 - -
7 Sobic.003G035001 - -
8 Sobic.002G015800 OsFBD13 - F-box and FBD domain containing protein, expressed -
9 Sobic.007G086701 - -
10 Sobic.003G101200 paired amphipathic helix repeat-containing protein, putative, expressed -
11 Sobic.009G056900 acetyltransferase, GNAT family protein, expressed -
12 Sobic.009G234500 similar to Cold acclimation protein COR413-TM1(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cold acclimation protein WCOR413, putative, expressed -
13 Sobic.001G261250 - -
14 Sobic.003G092600 seven in absentia protein family protein, expressed -
15 Sobic.001G392700 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
16 Sobic.004G262100 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
17 Sobic.005G083280 - -
18 Sobic.004G340566 - -
19 Sobic.001G324800 cysteine proteinase inhibitor 8 precursor, putative, expressed -
20 Sobic.004G322901 - -


Gene co-expression network
sample Sobic002G099866 Sobic002G099866 Sobic002G266600 Sobic002G266600 Sobic002G099866--Sobic002G266600 Sobic001G509100 Sobic001G509100 Sobic002G099866--Sobic001G509100 Sobic009G132400 Sobic009G132400 Sobic002G099866--Sobic009G132400 Sobic001G264600 Sobic001G264600 Sobic002G099866--Sobic001G264600 Sobic003G167200 Sobic003G167200 Sobic002G099866--Sobic003G167200 Sobic001G261529 Sobic001G261529 Sobic002G099866--Sobic001G261529 Sobic003G035001 Sobic003G035001 Sobic002G099866--Sobic003G035001 Sobic002G015800 Sobic002G015800 Sobic002G099866--Sobic002G015800 Sobic007G086701 Sobic007G086701 Sobic002G099866--Sobic007G086701 Sobic002G266600--Sobic001G264600 Sobic002G266600--Sobic002G099866 Sobic002G266600--Sobic003G167200 Sobic002G266600--Sobic007G086701 Sobic002G266600--Sobic001G261529 Sobic002G266600--Sobic003G035001 Sobic002G066700 Sobic002G066700 Sobic002G266600--Sobic002G066700 Sobic006G018751 Sobic006G018751 Sobic002G266600--Sobic006G018751 Sobic005G083280 Sobic005G083280 Sobic002G266600--Sobic005G083280 Sobic001G509100--Sobic002G099866 Sobic001G509100--Sobic002G015800 Sobic003G092600 Sobic003G092600 Sobic001G509100--Sobic003G092600 Sobic001G509100--Sobic003G035001 Sobic004G262100 Sobic004G262100 Sobic001G509100--Sobic004G262100 Sobic001G509100--Sobic002G266600 Sobic001G509100--Sobic001G261529 Sobic001G509100--Sobic009G132400 Sobic003G101200 Sobic003G101200 Sobic001G509100--Sobic003G101200 Sobic009G132400--Sobic002G099866 Sobic009G132400--Sobic002G266600 Sobic009G132400--Sobic001G509100 Sobic004G340566 Sobic004G340566 Sobic009G132400--Sobic004G340566 Sobic009G132400--Sobic003G167200 Sobic009G132400--Sobic001G264600 Sobic009G132400--Sobic001G261529 Sobic009G132400--Sobic003G035001 Sobic001G324800 Sobic001G324800 Sobic009G132400--Sobic001G324800 Sobic001G264600--Sobic007G086701 Sobic001G264600--Sobic002G266600 Sobic001G264600--Sobic006G018751 Sobic001G264600--Sobic001G261529 Sobic001G264600--Sobic005G083280 Sobic001G264600--Sobic002G099866 Sobic001G264600--Sobic002G066700 Sobic004G322901 Sobic004G322901 Sobic001G264600--Sobic004G322901 Sobic001G264600--Sobic003G167200 Sobic003G167200--Sobic002G266600 Sobic003G167200--Sobic003G035001 Sobic008G105600 Sobic008G105600 Sobic003G167200--Sobic008G105600 Sobic003G167200--Sobic002G099866 Sobic008G007900 Sobic008G007900 Sobic003G167200--Sobic008G007900 Sobic003G167200--Sobic001G264600 Sobic009G056900 Sobic009G056900 Sobic003G167200--Sobic009G056900 Sobic001G313150 Sobic001G313150 Sobic003G167200--Sobic001G313150 Sobic003G167200--Sobic009G132400 Sobic001G261529--Sobic005G083280 Sobic001G261529--Sobic004G322901 Sobic001G261529--Sobic001G264600 Sobic001G261529--Sobic003G092600 Sobic001G261529--Sobic002G015800 Sobic001G261529--Sobic002G266600 Sobic001G261529--Sobic007G086701 Sobic001G261529--Sobic006G018751 Sobic001G261529--Sobic002G099866 Sobic003G035001--Sobic003G167200 Sobic003G035001--Sobic002G266600 Sobic003G035001--Sobic002G099866 Sobic003G035001--Sobic001G509100 Sobic003G035001--Sobic001G264600 Sobic003G035001--Sobic001G261529 Sobic001G452100 Sobic001G452100 Sobic003G035001--Sobic001G452100 Sobic003G035001--Sobic008G007900 Sobic009G234500 Sobic009G234500 Sobic003G035001--Sobic009G234500 Sobic002G015800--Sobic003G092600 Sobic002G015800--Sobic001G261529 Sobic002G015800--Sobic005G083280 Sobic002G015800--Sobic004G262100 Sobic002G015800--Sobic001G509100 Sobic002G015800--Sobic001G324800 Sobic010G022600 Sobic010G022600 Sobic002G015800--Sobic010G022600 Sobic010G107300 Sobic010G107300 Sobic002G015800--Sobic010G107300 Sobic002G015800--Sobic004G322901 Sobic007G086701--Sobic006G018751 Sobic007G086701--Sobic001G264600 Sobic007G086701--Sobic002G266600 Sobic010G207900 Sobic010G207900 Sobic007G086701--Sobic010G207900 Sobic007G086701--Sobic001G261529 Sobic007G086701--Sobic002G066700 Sobic007G086701--Sobic005G083280 Sobic007G086701--Sobic004G322901 Sobic007G086701--Sobic002G099866
Octagon: transcription factors


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