Gene annotation
Transcriptome id Sobic.001G392700.1,Sobic.001G392700.2
Synonym CHO1, Sb01g037210, AIL5, EMK
Functional annotation AP2 domain containing protein, expressed
UniProt A0A1B6QNK8
Pfam PF00847
Panther DB PTHR32467 PTHR32467:SF19
NCBI CDD -
KEGG Orthology K09285; OVM, AP2-like factor, ANT lineage
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development


Orthologs (automatic annotation)
TAIR AT5G57390 : AINTEGUMENTA-like 5
RAP-DB (Rice) LOC_Os03g19900.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002201
Brachypodium KQK21962
Barley HORVU4Hr1G052870.1 , HORVU4Hr1G052880.2
Wheat TraesCS2D02G357600 , TraesCS4A02G123800 , TraesCS4B02G180600 , TraesCS4D02G182100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G056900 acetyltransferase, GNAT family protein, expressed -
2 Sobic.002G147400 homeodomain-related, putative, expressed -
3 Sobic.001G075201 - -
4 Sobic.002G066700 OsFBL33 - F-box domain and LRR containing protein, expressed -
5 Sobic.001G075200 - -
6 Sobic.005G201200 - -
7 Sobic.008G154600 pectinesterase inhibitor domain containing protein, putative, expressed -
8 Sobic.006G062600 TUDOR protein with multiple SNc domains, putative, expressed K15979: staphylococcal nuclease domain-containing protein 1
9 Sobic.002G266600 - K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
10 Sobic.009G119100 hexokinase, putative, expressed K00844: hexokinase
11 Sobic.001G264600 - -
12 Sobic.002G099866 - -
13 Sobic.002G016000 OsFBL32 - F-box domain and LRR containing protein, expressed -
14 Sobic.007G086701 - -
15 Sobic.003G167200 - -
16 Sobic.006G038700 - -
17 Sobic.001G313150 - -
18 Sobic.001G194500 - -
19 Sobic.002G014032 - -
20 Sobic.004G155700 LSM domain containing protein, expressed -


Gene co-expression network
sample Sobic001G392700 Sobic001G392700 Sobic009G056900 Sobic009G056900 Sobic001G392700--Sobic009G056900 Sobic002G147400 Sobic002G147400 Sobic001G392700--Sobic002G147400 Sobic001G075201 Sobic001G075201 Sobic001G392700--Sobic001G075201 Sobic002G066700 Sobic002G066700 Sobic001G392700--Sobic002G066700 Sobic001G075200 Sobic001G075200 Sobic001G392700--Sobic001G075200 Sobic005G201200 Sobic005G201200 Sobic001G392700--Sobic005G201200 Sobic008G154600 Sobic008G154600 Sobic001G392700--Sobic008G154600 Sobic006G062600 Sobic006G062600 Sobic001G392700--Sobic006G062600 Sobic002G266600 Sobic002G266600 Sobic001G392700--Sobic002G266600 Sobic009G056900--Sobic002G066700 Sobic009G056900--Sobic001G392700 Sobic009G056900--Sobic002G147400 Sobic009G056900--Sobic001G075201 Sobic009G056900--Sobic005G201200 Sobic006G038700 Sobic006G038700 Sobic009G056900--Sobic006G038700 Sobic002G016000 Sobic002G016000 Sobic009G056900--Sobic002G016000 Sobic009G056900--Sobic002G266600 Sobic003G167200 Sobic003G167200 Sobic009G056900--Sobic003G167200 Sobic002G147400--Sobic009G056900 Sobic002G147400--Sobic002G066700 Sobic002G147400--Sobic001G392700 Sobic002G147400--Sobic001G075201 Sobic002G147400--Sobic005G201200 Sobic002G147400--Sobic001G075200 Sobic002G147400--Sobic006G038700 Sobic001G194500 Sobic001G194500 Sobic002G147400--Sobic001G194500 Sobic002G147400--Sobic002G016000 Sobic009G119100 Sobic009G119100 Sobic001G075201--Sobic009G119100 Sobic001G075201--Sobic001G392700 Sobic001G075201--Sobic009G056900 Sobic001G075201--Sobic002G147400 Sobic001G075201--Sobic001G075200 Sobic001G075201--Sobic005G201200 Sobic001G075201--Sobic008G154600 Sobic002G014032 Sobic002G014032 Sobic001G075201--Sobic002G014032 Sobic001G075201--Sobic006G038700 Sobic002G066700--Sobic009G056900 Sobic002G066700--Sobic002G147400 Sobic002G066700--Sobic001G392700 Sobic002G066700--Sobic005G201200 Sobic007G086701 Sobic007G086701 Sobic002G066700--Sobic007G086701 Sobic002G066700--Sobic006G038700 Sobic001G264600 Sobic001G264600 Sobic002G066700--Sobic001G264600 Sobic005G206800 Sobic005G206800 Sobic002G066700--Sobic005G206800 Sobic002G066700--Sobic002G016000 Sobic001G075200--Sobic001G392700 Sobic001G075200--Sobic002G147400 Sobic001G075200--Sobic001G075201 Sobic001G075200--Sobic006G062600 Sobic001G075200--Sobic009G056900 Sobic001G075200--Sobic009G119100 Sobic001G075200--Sobic008G154600 Sobic001G075200--Sobic005G201200 Sobic007G068200 Sobic007G068200 Sobic001G075200--Sobic007G068200 Sobic005G201200--Sobic002G016000 Sobic008G007800 Sobic008G007800 Sobic005G201200--Sobic008G007800 Sobic005G201200--Sobic006G038700 Sobic004G064800 Sobic004G064800 Sobic005G201200--Sobic004G064800 Sobic009G006700 Sobic009G006700 Sobic005G201200--Sobic009G006700 Sobic010G255400 Sobic010G255400 Sobic005G201200--Sobic010G255400 Sobic005G201200--Sobic002G066700 Sobic002G304500 Sobic002G304500 Sobic005G201200--Sobic002G304500 Sobic005G201200--Sobic002G147400 Sobic008G154600--Sobic009G119100 Sobic008G154600--Sobic001G075201 Sobic008G154600--Sobic001G392700 Sobic001G305200 Sobic001G305200 Sobic008G154600--Sobic001G305200 Sobic008G154600--Sobic002G147400 Sobic008G154600--Sobic009G056900 Sobic008G154600--Sobic001G075200 Sobic004G186400 Sobic004G186400 Sobic008G154600--Sobic004G186400 Sobic001G313150 Sobic001G313150 Sobic008G154600--Sobic001G313150 Sobic006G062600--Sobic001G392700 Sobic006G062600--Sobic009G056900 Sobic006G062600--Sobic001G075200 Sobic006G062600--Sobic007G068200 Sobic006G062600--Sobic002G147400 Sobic006G062600--Sobic002G066700 Sobic010G207900 Sobic010G207900 Sobic006G062600--Sobic010G207900 Sobic006G062600--Sobic001G075201 Sobic006G062600--Sobic007G086701 Sobic002G266600--Sobic001G264600 Sobic002G099866 Sobic002G099866 Sobic002G266600--Sobic002G099866 Sobic002G266600--Sobic003G167200 Sobic002G266600--Sobic007G086701 Sobic001G261529 Sobic001G261529 Sobic002G266600--Sobic001G261529 Sobic003G035001 Sobic003G035001 Sobic002G266600--Sobic003G035001 Sobic002G266600--Sobic002G066700 Sobic006G018751 Sobic006G018751 Sobic002G266600--Sobic006G018751 Sobic005G083280 Sobic005G083280 Sobic002G266600--Sobic005G083280
Octagon: transcription factors


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