Gene annotation
Transcriptome id Sobic.006G062600.1
Synonym TSN2, Sb06g015025, Tudor2, AtTudor2
Functional annotation TUDOR protein with multiple SNc domains, putative, expressed
UniProt A0A1B6PKK0
Pfam PF00567 PF00565
Panther DB PTHR12302 PTHR12302:SF2
NCBI CDD KOG2039; Transcriptional coactivator p100
KEGG Orthology K15979; staphylococcal nuclease domain-containing protein 1
Gene Ontology GO:0003712; transcription coregulator activity


Orthologs (automatic annotation)
TAIR AT5G07350 : TUDOR-SN protein 1
RAP-DB (Rice) LOC_Os02g32350.2 : TUDOR protein with multiple SNc domains, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G392700 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
2 Sobic.009G056900 acetyltransferase, GNAT family protein, expressed -
3 Sobic.001G075200 - -
4 Sobic.007G068200 starch synthase III, putative, expressed -
5 Sobic.002G147400 homeodomain-related, putative, expressed -
6 Sobic.002G066700 OsFBL33 - F-box domain and LRR containing protein, expressed -
7 Sobic.010G207900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@prenyltransferase, putative, expressed K09833: HPT, HGGT, homogentisate phytyltransferase / homogentisate geranylgeranyltransferase
8 Sobic.001G075201 - -
9 Sobic.007G086701 - -
10 Sobic.007G080200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
11 Sobic.002G099866 - -
12 Sobic.002G014032 - -
13 Sobic.002G274700 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
14 Sobic.009G119100 hexokinase, putative, expressed K00844: hexokinase
15 Sobic.001G264600 - -
16 Sobic.006G018751 - -
17 Sobic.001G194500 - -
18 Sobic.002G022000 OsFBX212 - F-box domain containing protein, expressed -
19 Sobic.005G172800 expressed protein -
20 Sobic.002G266600 - K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1


Gene co-expression network
sample Sobic006G062600 Sobic006G062600 Sobic001G392700 Sobic001G392700 Sobic006G062600--Sobic001G392700 Sobic009G056900 Sobic009G056900 Sobic006G062600--Sobic009G056900 Sobic001G075200 Sobic001G075200 Sobic006G062600--Sobic001G075200 Sobic007G068200 Sobic007G068200 Sobic006G062600--Sobic007G068200 Sobic002G147400 Sobic002G147400 Sobic006G062600--Sobic002G147400 Sobic002G066700 Sobic002G066700 Sobic006G062600--Sobic002G066700 Sobic010G207900 Sobic010G207900 Sobic006G062600--Sobic010G207900 Sobic001G075201 Sobic001G075201 Sobic006G062600--Sobic001G075201 Sobic007G086701 Sobic007G086701 Sobic006G062600--Sobic007G086701 Sobic001G392700--Sobic009G056900 Sobic001G392700--Sobic002G147400 Sobic001G392700--Sobic001G075201 Sobic001G392700--Sobic002G066700 Sobic001G392700--Sobic001G075200 Sobic005G201200 Sobic005G201200 Sobic001G392700--Sobic005G201200 Sobic008G154600 Sobic008G154600 Sobic001G392700--Sobic008G154600 Sobic001G392700--Sobic006G062600 Sobic002G266600 Sobic002G266600 Sobic001G392700--Sobic002G266600 Sobic009G056900--Sobic002G066700 Sobic009G056900--Sobic001G392700 Sobic009G056900--Sobic002G147400 Sobic009G056900--Sobic001G075201 Sobic009G056900--Sobic005G201200 Sobic006G038700 Sobic006G038700 Sobic009G056900--Sobic006G038700 Sobic002G016000 Sobic002G016000 Sobic009G056900--Sobic002G016000 Sobic009G056900--Sobic002G266600 Sobic003G167200 Sobic003G167200 Sobic009G056900--Sobic003G167200 Sobic001G075200--Sobic001G392700 Sobic001G075200--Sobic002G147400 Sobic001G075200--Sobic001G075201 Sobic001G075200--Sobic006G062600 Sobic001G075200--Sobic009G056900 Sobic009G119100 Sobic009G119100 Sobic001G075200--Sobic009G119100 Sobic001G075200--Sobic008G154600 Sobic001G075200--Sobic005G201200 Sobic001G075200--Sobic007G068200 Sobic007G068200--Sobic006G062600 Sobic002G016800 Sobic002G016800 Sobic007G068200--Sobic002G016800 Sobic007G068200--Sobic001G075200 Sobic007G080200 Sobic007G080200 Sobic007G068200--Sobic007G080200 Sobic009G056100 Sobic009G056100 Sobic007G068200--Sobic009G056100 Sobic007G068200--Sobic001G392700 Sobic004G163700 Sobic004G163700 Sobic007G068200--Sobic004G163700 Sobic006G018751 Sobic006G018751 Sobic007G068200--Sobic006G018751 Sobic005G172800 Sobic005G172800 Sobic007G068200--Sobic005G172800 Sobic002G147400--Sobic009G056900 Sobic002G147400--Sobic002G066700 Sobic002G147400--Sobic001G392700 Sobic002G147400--Sobic001G075201 Sobic002G147400--Sobic005G201200 Sobic002G147400--Sobic001G075200 Sobic002G147400--Sobic006G038700 Sobic001G194500 Sobic001G194500 Sobic002G147400--Sobic001G194500 Sobic002G147400--Sobic002G016000 Sobic002G066700--Sobic009G056900 Sobic002G066700--Sobic002G147400 Sobic002G066700--Sobic001G392700 Sobic002G066700--Sobic005G201200 Sobic002G066700--Sobic007G086701 Sobic002G066700--Sobic006G038700 Sobic001G264600 Sobic001G264600 Sobic002G066700--Sobic001G264600 Sobic005G206800 Sobic005G206800 Sobic002G066700--Sobic005G206800 Sobic002G066700--Sobic002G016000 Sobic010G207900--Sobic006G018751 Sobic010G207900--Sobic007G086701 Sobic007G126000 Sobic007G126000 Sobic010G207900--Sobic007G126000 Sobic010G207900--Sobic001G264600 Sobic004G322901 Sobic004G322901 Sobic010G207900--Sobic004G322901 Sobic002G174500 Sobic002G174500 Sobic010G207900--Sobic002G174500 Sobic010G207900--Sobic009G056100 Sobic005G083280 Sobic005G083280 Sobic010G207900--Sobic005G083280 Sobic001G261529 Sobic001G261529 Sobic010G207900--Sobic001G261529 Sobic001G075201--Sobic009G119100 Sobic001G075201--Sobic001G392700 Sobic001G075201--Sobic009G056900 Sobic001G075201--Sobic002G147400 Sobic001G075201--Sobic001G075200 Sobic001G075201--Sobic005G201200 Sobic001G075201--Sobic008G154600 Sobic002G014032 Sobic002G014032 Sobic001G075201--Sobic002G014032 Sobic001G075201--Sobic006G038700 Sobic007G086701--Sobic006G018751 Sobic007G086701--Sobic001G264600 Sobic007G086701--Sobic002G266600 Sobic007G086701--Sobic010G207900 Sobic007G086701--Sobic001G261529 Sobic007G086701--Sobic002G066700 Sobic007G086701--Sobic005G083280 Sobic007G086701--Sobic004G322901 Sobic002G099866 Sobic002G099866 Sobic007G086701--Sobic002G099866
Octagon: transcription factors


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