Gene annotation
Transcriptome id Sobic.001G261529.1
Synonym -
Functional annotation -
UniProt A0A109NDN0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G083280 - -
2 Sobic.004G322901 - -
3 Sobic.001G264600 - -
4 Sobic.003G092600 seven in absentia protein family protein, expressed -
5 Sobic.002G015800 OsFBD13 - F-box and FBD domain containing protein, expressed -
6 Sobic.002G266600 - K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
7 Sobic.007G086701 - -
8 Sobic.006G018751 - -
9 Sobic.002G099866 - -
10 Sobic.001G509100 expressed protein -
11 Sobic.009G234500 similar to Cold acclimation protein COR413-TM1(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cold acclimation protein WCOR413, putative, expressed -
12 Sobic.004G262100 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
13 Sobic.009G014900 expressed protein -
14 Sobic.006G015800 "1,4-alpha-glucan branching enzyme/starch branching enzyme II, PULLULANASE 1, CHLOROPLASTIC"(PubMedID : 21853065)@Alpha amylase, catalytic domain containing protein, expressed -
15 Sobic.003G035001 - -
16 Sobic.001G324800 cysteine proteinase inhibitor 8 precursor, putative, expressed -
17 Sobic.010G207900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@prenyltransferase, putative, expressed K09833: HPT, HGGT, homogentisate phytyltransferase / homogentisate geranylgeranyltransferase
18 Sobic.007G126000 - -
19 Sobic.001G261250 - -
20 Sobic.009G132400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@microtubule associated protein, putative, expressed -


Gene co-expression network
sample Sobic001G261529 Sobic001G261529 Sobic005G083280 Sobic005G083280 Sobic001G261529--Sobic005G083280 Sobic004G322901 Sobic004G322901 Sobic001G261529--Sobic004G322901 Sobic001G264600 Sobic001G264600 Sobic001G261529--Sobic001G264600 Sobic003G092600 Sobic003G092600 Sobic001G261529--Sobic003G092600 Sobic002G015800 Sobic002G015800 Sobic001G261529--Sobic002G015800 Sobic002G266600 Sobic002G266600 Sobic001G261529--Sobic002G266600 Sobic007G086701 Sobic007G086701 Sobic001G261529--Sobic007G086701 Sobic006G018751 Sobic006G018751 Sobic001G261529--Sobic006G018751 Sobic002G099866 Sobic002G099866 Sobic001G261529--Sobic002G099866 Sobic005G083280--Sobic001G261529 Sobic005G083280--Sobic004G322901 Sobic005G083280--Sobic003G092600 Sobic005G083280--Sobic002G015800 Sobic005G083280--Sobic001G264600 Sobic005G083280--Sobic006G018751 Sobic006G015800 Sobic006G015800 Sobic005G083280--Sobic006G015800 Sobic005G083280--Sobic007G086701 Sobic009G014900 Sobic009G014900 Sobic005G083280--Sobic009G014900 Sobic004G322901--Sobic005G083280 Sobic004G322901--Sobic001G261529 Sobic004G322901--Sobic003G092600 Sobic004G322901--Sobic009G014900 Sobic004G322901--Sobic006G015800 Sobic007G126000 Sobic007G126000 Sobic004G322901--Sobic007G126000 Sobic002G147466 Sobic002G147466 Sobic004G322901--Sobic002G147466 Sobic004G322901--Sobic006G018751 Sobic004G322901--Sobic002G015800 Sobic001G264600--Sobic007G086701 Sobic001G264600--Sobic002G266600 Sobic001G264600--Sobic006G018751 Sobic001G264600--Sobic001G261529 Sobic001G264600--Sobic005G083280 Sobic001G264600--Sobic002G099866 Sobic002G066700 Sobic002G066700 Sobic001G264600--Sobic002G066700 Sobic001G264600--Sobic004G322901 Sobic003G167200 Sobic003G167200 Sobic001G264600--Sobic003G167200 Sobic003G092600--Sobic002G015800 Sobic003G092600--Sobic005G083280 Sobic003G092600--Sobic001G261529 Sobic003G092600--Sobic004G322901 Sobic003G092600--Sobic009G014900 Sobic003G092600--Sobic006G015800 Sobic004G262100 Sobic004G262100 Sobic003G092600--Sobic004G262100 Sobic001G324800 Sobic001G324800 Sobic003G092600--Sobic001G324800 Sobic001G509100 Sobic001G509100 Sobic003G092600--Sobic001G509100 Sobic002G015800--Sobic003G092600 Sobic002G015800--Sobic001G261529 Sobic002G015800--Sobic005G083280 Sobic002G015800--Sobic004G262100 Sobic002G015800--Sobic001G509100 Sobic002G015800--Sobic001G324800 Sobic010G022600 Sobic010G022600 Sobic002G015800--Sobic010G022600 Sobic010G107300 Sobic010G107300 Sobic002G015800--Sobic010G107300 Sobic002G015800--Sobic004G322901 Sobic002G266600--Sobic001G264600 Sobic002G266600--Sobic002G099866 Sobic002G266600--Sobic003G167200 Sobic002G266600--Sobic007G086701 Sobic002G266600--Sobic001G261529 Sobic003G035001 Sobic003G035001 Sobic002G266600--Sobic003G035001 Sobic002G266600--Sobic002G066700 Sobic002G266600--Sobic006G018751 Sobic002G266600--Sobic005G083280 Sobic007G086701--Sobic006G018751 Sobic007G086701--Sobic001G264600 Sobic007G086701--Sobic002G266600 Sobic010G207900 Sobic010G207900 Sobic007G086701--Sobic010G207900 Sobic007G086701--Sobic001G261529 Sobic007G086701--Sobic002G066700 Sobic007G086701--Sobic005G083280 Sobic007G086701--Sobic004G322901 Sobic007G086701--Sobic002G099866 Sobic006G018751--Sobic007G086701 Sobic006G018751--Sobic010G207900 Sobic006G018751--Sobic001G264600 Sobic006G018751--Sobic001G261529 Sobic006G018751--Sobic005G083280 Sobic006G018751--Sobic007G126000 Sobic006G018751--Sobic004G322901 Sobic006G018751--Sobic002G266600 Sobic006G018751--Sobic002G066700 Sobic002G099866--Sobic002G266600 Sobic002G099866--Sobic001G509100 Sobic009G132400 Sobic009G132400 Sobic002G099866--Sobic009G132400 Sobic002G099866--Sobic001G264600 Sobic002G099866--Sobic003G167200 Sobic002G099866--Sobic001G261529 Sobic002G099866--Sobic003G035001 Sobic002G099866--Sobic002G015800 Sobic002G099866--Sobic007G086701
Octagon: transcription factors


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