Gene annotation
Transcriptome id Sobic.002G113700.1,Sobic.002G113700.2
Synonym Sb02g009720,
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Up-reguralion under heat (PubMedID : 24916767)
lipase, putative, expressed
UniProt C5X4B3 , A0A1W0W3F8
Pfam -
Panther DB PTHR34043 PTHR34043:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G10740 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g33820.1 : lipase, putative, expressed
MaizeGDB (Corn) Zm00025a043669 , Zm00025a045714
Brachypodium -
Barley HORVU3Hr1G089850.11 , HORVU3Hr1G089850.10 , HORVU3Hr1G089850.12 , HORVU3Hr1G089850.9 , HORVU3Hr1G089850.8 , HORVU3Hr1G089850.5 , HORVU3Hr1G089850.4 , HORVU3Hr1G089850.7 , HORVU3Hr1G089850.6 , HORVU3Hr1G089850.1 , HORVU3Hr1G089850.3 , HORVU3Hr1G089850.2
Wheat TraesCS3D02G393300 , TraesCS3B02G432100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G092700 - -
2 Sobic.005G006701 - -
3 Sobic.010G043300 expressed protein -
4 Sobic.008G046300 STE_PAK_Ste20_Slob_Wnk.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
5 Sobic.004G089400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
6 Sobic.001G092650 - -
7 Sobic.007G010350 - -
8 Sobic.007G219300 BURP domain containing protein, expressed -
9 Sobic.003G180700 major facilitator superfamily antiporter, putative, expressed -
10 Sobic.001G355300 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
11 Sobic.004G149200 ankyrin, putative, expressed -
12 Sobic.007G083500 speckle-type POZ protein, putative, expressed K10523: speckle-type POZ protein
13 Sobic.009G067100 cytochrome P450, putative, expressed -
14 Sobic.003G062900 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
15 Sobic.006G067300 OsFBX103 - F-box domain containing protein, expressed -
16 Sobic.002G260100 - -
17 Sobic.003G164300 cullin, putative, expressed K03347: CUL1, cullin 1
18 Sobic.006G059400 - -
19 Sobic.008G101850 - -
20 Sobic.001G359100 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic002G113700 Sobic002G113700 Sobic001G092700 Sobic001G092700 Sobic002G113700--Sobic001G092700 Sobic005G006701 Sobic005G006701 Sobic002G113700--Sobic005G006701 Sobic010G043300 Sobic010G043300 Sobic002G113700--Sobic010G043300 Sobic008G046300 Sobic008G046300 Sobic002G113700--Sobic008G046300 Sobic004G089400 Sobic004G089400 Sobic002G113700--Sobic004G089400 Sobic001G092650 Sobic001G092650 Sobic002G113700--Sobic001G092650 Sobic007G010350 Sobic007G010350 Sobic002G113700--Sobic007G010350 Sobic007G219300 Sobic007G219300 Sobic002G113700--Sobic007G219300 Sobic003G180700 Sobic003G180700 Sobic002G113700--Sobic003G180700 Sobic001G092700--Sobic010G043300 Sobic001G092700--Sobic001G092650 Sobic001G092700--Sobic007G219300 Sobic001G092700--Sobic003G180700 Sobic001G355300 Sobic001G355300 Sobic001G092700--Sobic001G355300 Sobic009G067100 Sobic009G067100 Sobic001G092700--Sobic009G067100 Sobic007G083500 Sobic007G083500 Sobic001G092700--Sobic007G083500 Sobic001G092700--Sobic007G010350 Sobic001G092700--Sobic005G006701 Sobic005G006701--Sobic004G089400 Sobic005G006701--Sobic010G043300 Sobic004G149200 Sobic004G149200 Sobic005G006701--Sobic004G149200 Sobic005G006701--Sobic007G010350 Sobic006G067300 Sobic006G067300 Sobic005G006701--Sobic006G067300 Sobic002G260100 Sobic002G260100 Sobic005G006701--Sobic002G260100 Sobic005G006701--Sobic001G092700 Sobic003G062900 Sobic003G062900 Sobic005G006701--Sobic003G062900 Sobic003G164300 Sobic003G164300 Sobic005G006701--Sobic003G164300 Sobic010G043300--Sobic005G006701 Sobic010G043300--Sobic007G219300 Sobic010G043300--Sobic007G010350 Sobic010G043300--Sobic001G092650 Sobic010G043300--Sobic003G180700 Sobic010G043300--Sobic001G355300 Sobic010G043300--Sobic001G092700 Sobic010G043300--Sobic009G067100 Sobic010G043300--Sobic007G083500 Sobic008G046300--Sobic003G180700 Sobic008G046300--Sobic001G355300 Sobic002G298500 Sobic002G298500 Sobic008G046300--Sobic002G298500 Sobic008G046300--Sobic007G219300 Sobic006G018000 Sobic006G018000 Sobic008G046300--Sobic006G018000 Sobic008G046300--Sobic009G067100 Sobic008G046300--Sobic001G092700 Sobic008G046300--Sobic007G083500 Sobic008G046300--Sobic001G092650 Sobic004G089400--Sobic005G006701 Sobic004G089400--Sobic004G149200 Sobic004G089400--Sobic003G062900 Sobic004G089400--Sobic010G043300 Sobic004G089400--Sobic002G260100 Sobic006G059400 Sobic006G059400 Sobic004G089400--Sobic006G059400 Sobic004G089400--Sobic006G067300 Sobic003G070200 Sobic003G070200 Sobic004G089400--Sobic003G070200 Sobic001G359100 Sobic001G359100 Sobic004G089400--Sobic001G359100 Sobic001G092650--Sobic007G219300 Sobic001G092650--Sobic003G180700 Sobic001G092650--Sobic001G355300 Sobic001G092650--Sobic009G067100 Sobic001G092650--Sobic007G083500 Sobic001G092650--Sobic010G043300 Sobic001G092650--Sobic002G298500 Sobic001G092650--Sobic001G092700 Sobic001G092650--Sobic007G010350 Sobic007G010350--Sobic010G043300 Sobic007G010350--Sobic005G006701 Sobic007G010350--Sobic003G164300 Sobic007G010350--Sobic007G219300 Sobic007G010350--Sobic001G092650 Sobic007G010350--Sobic003G180700 Sobic007G010350--Sobic001G355300 Sobic007G010350--Sobic001G092700 Sobic007G010350--Sobic009G067100 Sobic007G219300--Sobic003G180700 Sobic007G219300--Sobic001G355300 Sobic007G219300--Sobic009G067100 Sobic007G219300--Sobic007G083500 Sobic007G219300--Sobic001G092650 Sobic007G219300--Sobic002G298500 Sobic007G219300--Sobic010G043300 Sobic007G219300--Sobic006G018000 Sobic005G125400 Sobic005G125400 Sobic007G219300--Sobic005G125400 Sobic003G180700--Sobic001G355300 Sobic003G180700--Sobic007G219300 Sobic003G180700--Sobic009G067100 Sobic003G180700--Sobic007G083500 Sobic003G180700--Sobic002G298500 Sobic003G180700--Sobic001G092650 Sobic003G180700--Sobic006G018000 Sobic003G180700--Sobic010G043300 Sobic003G180700--Sobic005G125400
Octagon: transcription factors


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