Gene annotation
Transcriptome id Sobic.002G325700.2
Synonym Sb02g035285
Functional annotation expressed protein
UniProt A0A1B6QEP2
Pfam PF12776
Panther DB PTHR33068 PTHR33068:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05800 : -
RAP-DB (Rice) LOC_Os03g44510.1 : transposon protein, putative, CACTA, En/Spm sub-class, expressed
MaizeGDB (Corn) Zm00025a039105
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G197200 expressed protein -
2 Sobic.004G094900 expressed protein -
3 Sobic.001G197300 kinase, putative, expressed -
4 Sobic.007G100032 - -
5 Sobic.001G381400 expressed protein -
6 Sobic.002G347200 - -
7 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
8 Sobic.002G390000 dirigent, putative, expressed -
9 Sobic.002G250900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.008G079500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.001G065900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.006G053900 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR3 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
13 Sobic.002G090100 - -
14 Sobic.002G090100 - -
15 Sobic.002G090100 - -
16 Sobic.002G090100 - -
17 Sobic.002G090100 - -
18 Sobic.002G090100 - -
19 Sobic.007G039500 aquaporin protein, putative, expressed K09874: aquaporin NIP
20 Sobic.002G238600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -


Gene co-expression network
sample Sobic002G325700 Sobic002G325700 Sobic001G197200 Sobic001G197200 Sobic002G325700--Sobic001G197200 Sobic004G094900 Sobic004G094900 Sobic002G325700--Sobic004G094900 Sobic001G197300 Sobic001G197300 Sobic002G325700--Sobic001G197300 Sobic007G100032 Sobic007G100032 Sobic002G325700--Sobic007G100032 Sobic001G381400 Sobic001G381400 Sobic002G325700--Sobic001G381400 Sobic002G347200 Sobic002G347200 Sobic002G325700--Sobic002G347200 Sobic002G388800 Sobic002G388800 Sobic002G325700--Sobic002G388800 Sobic002G390000 Sobic002G390000 Sobic002G325700--Sobic002G390000 Sobic002G250900 Sobic002G250900 Sobic002G325700--Sobic002G250900 Sobic003G039800 Sobic003G039800 Sobic001G197200--Sobic003G039800 Sobic001G197200--Sobic002G325700 Sobic008G141501 Sobic008G141501 Sobic001G197200--Sobic008G141501 Sobic004G172201 Sobic004G172201 Sobic001G197200--Sobic004G172201 Sobic007G138600 Sobic007G138600 Sobic001G197200--Sobic007G138600 Sobic007G159300 Sobic007G159300 Sobic001G197200--Sobic007G159300 Sobic003G392800 Sobic003G392800 Sobic001G197200--Sobic003G392800 Sobic007G099700 Sobic007G099700 Sobic001G197200--Sobic007G099700 Sobic003G314200 Sobic003G314200 Sobic001G197200--Sobic003G314200 Sobic004G094900--Sobic001G381400 Sobic004G094900--Sobic002G390000 Sobic004G094900--Sobic007G100032 Sobic008G079500 Sobic008G079500 Sobic004G094900--Sobic008G079500 Sobic002G090100 Sobic002G090100 Sobic004G094900--Sobic002G090100 Sobic010G136400 Sobic010G136400 Sobic001G197300--Sobic010G136400 Sobic001G197300--Sobic007G100032 Sobic006G063400 Sobic006G063400 Sobic001G197300--Sobic006G063400 Sobic007G101900 Sobic007G101900 Sobic001G197300--Sobic007G101900 Sobic001G197300--Sobic004G094900 Sobic008G104100 Sobic008G104100 Sobic001G197300--Sobic008G104100 Sobic001G065900 Sobic001G065900 Sobic001G197300--Sobic001G065900 Sobic004G135000 Sobic004G135000 Sobic001G197300--Sobic004G135000 Sobic001G197300--Sobic001G381400 Sobic007G100032--Sobic001G197300 Sobic007G100032--Sobic004G094900 Sobic007G100032--Sobic010G136400 Sobic007G100032--Sobic001G381400 Sobic007G100032--Sobic001G065900 Sobic007G100032--Sobic006G063400 Sobic007G100032--Sobic008G079500 Sobic003G060100 Sobic003G060100 Sobic007G100032--Sobic003G060100 Sobic007G100032--Sobic007G101900 Sobic001G381400--Sobic002G090100 Sobic001G381400--Sobic004G094900 Sobic001G381400--Sobic002G390000 Sobic007G159100 Sobic007G159100 Sobic001G381400--Sobic007G159100 Sobic010G107901 Sobic010G107901 Sobic002G347200--Sobic010G107901 Sobic002G397700 Sobic002G397700 Sobic002G347200--Sobic002G397700 Sobic003G172450 Sobic003G172450 Sobic002G347200--Sobic003G172450 Sobic004G234766 Sobic004G234766 Sobic002G347200--Sobic004G234766 Sobic002G322101 Sobic002G322101 Sobic002G347200--Sobic002G322101 Sobic006G093550 Sobic006G093550 Sobic002G347200--Sobic006G093550 Sobic006G139200 Sobic006G139200 Sobic002G347200--Sobic006G139200 Sobic002G347200--Sobic002G325700 Sobic002G040550 Sobic002G040550 Sobic002G347200--Sobic002G040550 Sobic004G263100 Sobic004G263100 Sobic002G388800--Sobic004G263100 Sobic005G171001 Sobic005G171001 Sobic002G388800--Sobic005G171001 Sobic004G092800 Sobic004G092800 Sobic002G388800--Sobic004G092800 Sobic002G388800--Sobic001G065900 Sobic002G388800--Sobic001G381400 Sobic002G388800--Sobic002G390000 Sobic002G102132 Sobic002G102132 Sobic002G388800--Sobic002G102132 Sobic002G388800--Sobic007G159100 Sobic004G251800 Sobic004G251800 Sobic002G388800--Sobic004G251800 Sobic002G238600 Sobic002G238600 Sobic002G390000--Sobic002G238600 Sobic002G390000--Sobic001G381400 Sobic002G390000--Sobic004G094900 Sobic002G390000--Sobic002G090100 Sobic002G250900--Sobic002G388800 Sobic009G194400 Sobic009G194400 Sobic002G250900--Sobic009G194400 Sobic001G143100 Sobic001G143100 Sobic002G250900--Sobic001G143100 Sobic002G250900--Sobic003G060100 Sobic003G370600 Sobic003G370600 Sobic002G250900--Sobic003G370600 Sobic002G269100 Sobic002G269100 Sobic002G250900--Sobic002G269100 Sobic004G097100 Sobic004G097100 Sobic002G250900--Sobic004G097100 Sobic002G250900--Sobic004G092800 Sobic002G250900--Sobic001G065900
Octagon: transcription factors


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