Gene annotation
Transcriptome id Sobic.003G047450.1
Synonym -
Functional annotation -
UniProt A0A1W0VVP7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.K008450 - -
2 Sobic.007G144400 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
3 Sobic.007G144400 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
4 Sobic.007G144400 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
5 Sobic.004G006966 - -
6 Sobic.004G006966 - -
7 Sobic.004G006966 - -
8 Sobic.004G006966 - -
9 Sobic.004G006966 - -
10 Sobic.003G215900 appr-1-p processing enzyme family protein, putative, expressed -
11 Sobic.009G061300 - -
12 Sobic.001G445850 - -
13 Sobic.001G445850 - -
14 Sobic.001G445850 - -
15 Sobic.001G445850 - -
16 Sobic.001G445850 - -
17 Sobic.001G445850 - -
18 Sobic.003G374150 - -
19 Sobic.004G304000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
20 Sobic.005G136800 only inducible by pathogen inoculation(PubMedID : 20529887)@"SbCHS2 encodes a typical CHS that synthesizes naringenin chalcone, which is necessary for the formation of different flavonoid metabolites."(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase


Gene co-expression network
sample Sobic003G047450 Sobic003G047450 SobicK008450 SobicK008450 Sobic003G047450--SobicK008450 Sobic007G144400 Sobic007G144400 Sobic003G047450--Sobic007G144400 Sobic004G006966 Sobic004G006966 Sobic003G047450--Sobic004G006966 Sobic009G067600 Sobic009G067600 SobicK008450--Sobic009G067600 Sobic010G107000 Sobic010G107000 SobicK008450--Sobic010G107000 Sobic007G202800 Sobic007G202800 SobicK008450--Sobic007G202800 Sobic009G211400 Sobic009G211400 SobicK008450--Sobic009G211400 Sobic009G193700 Sobic009G193700 SobicK008450--Sobic009G193700 SobicK008450--Sobic003G047450 Sobic003G219600 Sobic003G219600 SobicK008450--Sobic003G219600 Sobic006G125400 Sobic006G125400 SobicK008450--Sobic006G125400 Sobic005G018500 Sobic005G018500 SobicK008450--Sobic005G018500 Sobic007G144400--Sobic007G144400 Sobic007G044500 Sobic007G044500 Sobic007G144400--Sobic007G044500 Sobic005G083733 Sobic005G083733 Sobic007G144400--Sobic005G083733 Sobic003G400266 Sobic003G400266 Sobic007G144400--Sobic003G400266 Sobic003G148700 Sobic003G148700 Sobic007G144400--Sobic003G148700 Sobic002G051300 Sobic002G051300 Sobic007G144400--Sobic002G051300 Sobic001G277000 Sobic001G277000 Sobic007G144400--Sobic001G277000 Sobic001G015300 Sobic001G015300 Sobic007G144400--Sobic001G015300 Sobic004G006966--Sobic004G006966 Sobic003G374150 Sobic003G374150 Sobic004G006966--Sobic003G374150 Sobic005G136800 Sobic005G136800 Sobic004G006966--Sobic005G136800 Sobic010G016800 Sobic010G016800 Sobic004G006966--Sobic010G016800 Sobic001G483500 Sobic001G483500 Sobic004G006966--Sobic001G483500 Sobic002G182850 Sobic002G182850 Sobic004G006966--Sobic002G182850
Octagon: transcription factors


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