Gene annotation
Transcriptome id Sobic.K008450.1
Synonym -
Functional annotation -
UniProt A0A1W0VQT1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G067600 - -
2 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
3 Sobic.007G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
4 Sobic.009G211400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
5 Sobic.009G193700 transmembrane protein 56, putative, expressed -
6 Sobic.003G047450 - -
7 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
8 Sobic.006G125400 steroid nuclear receptor, ligand-binding, putative, expressed -
9 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
10 Sobic.001G159700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
11 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
12 Sobic.002G032700 "Photosystem II 10kDa polypeptide, chloroplastic (Precursor)"(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@PSBR -photosystem II subunit R (At)(PubMedID : 27208977)@photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed K03541: photosystem II 10kDa protein
13 Sobic.006G138400 regulatory subunit, putative, expressed -
14 Sobic.010G203000 - -
15 Sobic.004G355000 SAC9, putative, expressed -
16 Sobic.003G148800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K09699: DBT, 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
17 Sobic.001G298500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
19 Sobic.008G017800 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
20 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample SobicK008450 SobicK008450 Sobic009G067600 Sobic009G067600 SobicK008450--Sobic009G067600 Sobic010G107000 Sobic010G107000 SobicK008450--Sobic010G107000 Sobic007G202800 Sobic007G202800 SobicK008450--Sobic007G202800 Sobic009G211400 Sobic009G211400 SobicK008450--Sobic009G211400 Sobic009G193700 Sobic009G193700 SobicK008450--Sobic009G193700 Sobic003G047450 Sobic003G047450 SobicK008450--Sobic003G047450 Sobic003G219600 Sobic003G219600 SobicK008450--Sobic003G219600 Sobic006G125400 Sobic006G125400 SobicK008450--Sobic006G125400 Sobic005G018500 Sobic005G018500 SobicK008450--Sobic005G018500 Sobic009G067600--Sobic006G125400 Sobic009G197700 Sobic009G197700 Sobic009G067600--Sobic009G197700 Sobic006G146100 Sobic006G146100 Sobic009G067600--Sobic006G146100 Sobic007G060000 Sobic007G060000 Sobic009G067600--Sobic007G060000 Sobic001G235500 Sobic001G235500 Sobic009G067600--Sobic001G235500 Sobic002G028800 Sobic002G028800 Sobic009G067600--Sobic002G028800 Sobic009G067600--SobicK008450 Sobic002G148000 Sobic002G148000 Sobic009G067600--Sobic002G148000 Sobic007G220000 Sobic007G220000 Sobic009G067600--Sobic007G220000 Sobic010G107000--Sobic009G211400 Sobic001G325200 Sobic001G325200 Sobic010G107000--Sobic001G325200 Sobic010G107000--Sobic009G193700 Sobic003G355600 Sobic003G355600 Sobic010G107000--Sobic003G355600 Sobic010G107000--Sobic003G219600 Sobic001G150200 Sobic001G150200 Sobic010G107000--Sobic001G150200 Sobic009G029600 Sobic009G029600 Sobic010G107000--Sobic009G029600 Sobic009G226300 Sobic009G226300 Sobic010G107000--Sobic009G226300 Sobic003G138200 Sobic003G138200 Sobic010G107000--Sobic003G138200 Sobic007G120401 Sobic007G120401 Sobic007G202800--Sobic007G120401 Sobic005G209000 Sobic005G209000 Sobic007G202800--Sobic005G209000 Sobic007G189500 Sobic007G189500 Sobic007G202800--Sobic007G189500 Sobic001G087100 Sobic001G087100 Sobic007G202800--Sobic001G087100 Sobic001G240300 Sobic001G240300 Sobic007G202800--Sobic001G240300 Sobic009G154600 Sobic009G154600 Sobic007G202800--Sobic009G154600 Sobic010G057300 Sobic010G057300 Sobic007G202800--Sobic010G057300 Sobic006G228700 Sobic006G228700 Sobic007G202800--Sobic006G228700 Sobic010G083900 Sobic010G083900 Sobic007G202800--Sobic010G083900 Sobic009G211400--Sobic003G219600 Sobic009G211400--Sobic010G107000 Sobic009G211400--Sobic009G029600 Sobic009G211400--Sobic003G138200 Sobic004G260000 Sobic004G260000 Sobic009G211400--Sobic004G260000 Sobic002G215800 Sobic002G215800 Sobic009G211400--Sobic002G215800 Sobic009G054500 Sobic009G054500 Sobic009G211400--Sobic009G054500 Sobic009G211400--Sobic009G193700 Sobic009G211400--Sobic005G018500 Sobic009G193700--Sobic010G107000 Sobic008G062200 Sobic008G062200 Sobic009G193700--Sobic008G062200 Sobic009G193700--Sobic009G211400 Sobic009G193700--Sobic003G355600 Sobic009G193700--Sobic009G029600 Sobic009G193700--Sobic004G260000 Sobic009G193700--Sobic003G219600 Sobic006G199000 Sobic006G199000 Sobic009G193700--Sobic006G199000 Sobic001G089800 Sobic001G089800 Sobic009G193700--Sobic001G089800 Sobic003G047450--SobicK008450 Sobic007G144400 Sobic007G144400 Sobic003G047450--Sobic007G144400 Sobic004G006966 Sobic004G006966 Sobic003G047450--Sobic004G006966 Sobic003G219600--Sobic009G211400 Sobic003G219600--Sobic009G029600 Sobic003G259200 Sobic003G259200 Sobic003G219600--Sobic003G259200 Sobic003G219600--Sobic009G054500 Sobic003G219600--Sobic005G018500 Sobic004G255000 Sobic004G255000 Sobic003G219600--Sobic004G255000 Sobic001G249300 Sobic001G249300 Sobic003G219600--Sobic001G249300 Sobic003G219600--Sobic004G260000 Sobic003G219600--Sobic009G226300 Sobic006G204900 Sobic006G204900 Sobic006G125400--Sobic006G204900 Sobic010G043400 Sobic010G043400 Sobic006G125400--Sobic010G043400 Sobic004G269200 Sobic004G269200 Sobic006G125400--Sobic004G269200 Sobic006G125400--Sobic010G107000 Sobic001G207400 Sobic001G207400 Sobic006G125400--Sobic001G207400 Sobic006G125400--Sobic003G355600 Sobic006G271200 Sobic006G271200 Sobic006G125400--Sobic006G271200 Sobic006G214200 Sobic006G214200 Sobic006G125400--Sobic006G214200 Sobic002G009700 Sobic002G009700 Sobic006G125400--Sobic002G009700 Sobic005G018500--Sobic009G054500 Sobic005G018500--Sobic004G260000 Sobic005G018500--Sobic004G255000 Sobic005G018500--Sobic003G259200 Sobic005G018500--Sobic009G226300 Sobic005G018500--Sobic001G249300 Sobic003G148800 Sobic003G148800 Sobic005G018500--Sobic003G148800 Sobic005G018500--Sobic003G219600 Sobic007G187300 Sobic007G187300 Sobic005G018500--Sobic007G187300
Octagon: transcription factors


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