Gene annotation
Transcriptome id Sobic.009G067600.1
Synonym
Functional annotation -
UniProt A0A1B6P6X4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G125400 steroid nuclear receptor, ligand-binding, putative, expressed -
2 Sobic.009G197700 expressed protein -
3 Sobic.006G146100 Os4bglu18 - monolignol beta-glucoside homologue, expressed K05350: beta-glucosidase
4 Sobic.007G060000 octicosapeptide/Phox/Bem1p, putative, expressed -
5 Sobic.001G235500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.002G028800 - -
7 Sobic.K008450 - -
8 Sobic.002G148000 - -
9 Sobic.007G220000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@C3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
10 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.009G193700 transmembrane protein 56, putative, expressed -
12 Sobic.002G292100 auxin efflux carrier component, putative, expressed -
13 Sobic.009G211400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
14 Sobic.001G034300 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
15 Sobic.001G217400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
16 Sobic.001G251900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
17 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
18 Sobic.010G043400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G298500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1


Gene co-expression network
sample Sobic009G067600 Sobic009G067600 Sobic006G125400 Sobic006G125400 Sobic009G067600--Sobic006G125400 Sobic009G197700 Sobic009G197700 Sobic009G067600--Sobic009G197700 Sobic006G146100 Sobic006G146100 Sobic009G067600--Sobic006G146100 Sobic007G060000 Sobic007G060000 Sobic009G067600--Sobic007G060000 Sobic001G235500 Sobic001G235500 Sobic009G067600--Sobic001G235500 Sobic002G028800 Sobic002G028800 Sobic009G067600--Sobic002G028800 SobicK008450 SobicK008450 Sobic009G067600--SobicK008450 Sobic002G148000 Sobic002G148000 Sobic009G067600--Sobic002G148000 Sobic007G220000 Sobic007G220000 Sobic009G067600--Sobic007G220000 Sobic006G204900 Sobic006G204900 Sobic006G125400--Sobic006G204900 Sobic010G043400 Sobic010G043400 Sobic006G125400--Sobic010G043400 Sobic004G269200 Sobic004G269200 Sobic006G125400--Sobic004G269200 Sobic010G107000 Sobic010G107000 Sobic006G125400--Sobic010G107000 Sobic001G207400 Sobic001G207400 Sobic006G125400--Sobic001G207400 Sobic003G355600 Sobic003G355600 Sobic006G125400--Sobic003G355600 Sobic006G271200 Sobic006G271200 Sobic006G125400--Sobic006G271200 Sobic006G214200 Sobic006G214200 Sobic006G125400--Sobic006G214200 Sobic002G009700 Sobic002G009700 Sobic006G125400--Sobic002G009700 Sobic005G136800 Sobic005G136800 Sobic009G197700--Sobic005G136800 Sobic003G374150 Sobic003G374150 Sobic009G197700--Sobic003G374150 Sobic004G006966 Sobic004G006966 Sobic009G197700--Sobic004G006966 Sobic001G251900 Sobic001G251900 Sobic009G197700--Sobic001G251900 Sobic001G432550 Sobic001G432550 Sobic009G197700--Sobic001G432550 Sobic006G146100--Sobic001G235500 Sobic001G092000 Sobic001G092000 Sobic006G146100--Sobic001G092000 Sobic009G038501 Sobic009G038501 Sobic006G146100--Sobic009G038501 Sobic001G217400 Sobic001G217400 Sobic006G146100--Sobic001G217400 Sobic005G215766 Sobic005G215766 Sobic006G146100--Sobic005G215766 Sobic003G059300 Sobic003G059300 Sobic006G146100--Sobic003G059300 Sobic008G144500 Sobic008G144500 Sobic006G146100--Sobic008G144500 Sobic006G146100--Sobic009G197700 Sobic003G360900 Sobic003G360900 Sobic006G146100--Sobic003G360900 Sobic006G004500 Sobic006G004500 Sobic007G060000--Sobic006G004500 Sobic001G436900 Sobic001G436900 Sobic007G060000--Sobic001G436900 Sobic003G320700 Sobic003G320700 Sobic007G060000--Sobic003G320700 Sobic007G060000--Sobic006G204900 Sobic006G126500 Sobic006G126500 Sobic007G060000--Sobic006G126500 Sobic001G305500 Sobic001G305500 Sobic007G060000--Sobic001G305500 Sobic002G346400 Sobic002G346400 Sobic007G060000--Sobic002G346400 Sobic003G089000 Sobic003G089000 Sobic007G060000--Sobic003G089000 Sobic002G058500 Sobic002G058500 Sobic007G060000--Sobic002G058500 Sobic009G136100 Sobic009G136100 Sobic001G235500--Sobic009G136100 Sobic009G118600 Sobic009G118600 Sobic001G235500--Sobic009G118600 Sobic001G235500--Sobic005G215766 Sobic006G115300 Sobic006G115300 Sobic001G235500--Sobic006G115300 Sobic004G200800 Sobic004G200800 Sobic001G235500--Sobic004G200800 Sobic009G236300 Sobic009G236300 Sobic001G235500--Sobic009G236300 Sobic001G235500--Sobic006G146100 Sobic006G086100 Sobic006G086100 Sobic001G235500--Sobic006G086100 Sobic009G097300 Sobic009G097300 Sobic001G235500--Sobic009G097300 Sobic001G130800 Sobic001G130800 Sobic002G028800--Sobic001G130800 Sobic005G221250 Sobic005G221250 Sobic002G028800--Sobic005G221250 Sobic002G428501 Sobic002G428501 Sobic002G028800--Sobic002G428501 Sobic002G028800--Sobic009G067600 Sobic002G190200 Sobic002G190200 Sobic002G028800--Sobic002G190200 Sobic006G061900 Sobic006G061900 Sobic002G028800--Sobic006G061900 Sobic005G087900 Sobic005G087900 Sobic002G028800--Sobic005G087900 Sobic001G521500 Sobic001G521500 Sobic002G028800--Sobic001G521500 Sobic002G229600 Sobic002G229600 Sobic002G028800--Sobic002G229600 SobicK008450--Sobic009G067600 SobicK008450--Sobic010G107000 Sobic007G202800 Sobic007G202800 SobicK008450--Sobic007G202800 Sobic009G211400 Sobic009G211400 SobicK008450--Sobic009G211400 Sobic009G193700 Sobic009G193700 SobicK008450--Sobic009G193700 Sobic003G047450 Sobic003G047450 SobicK008450--Sobic003G047450 Sobic003G219600 Sobic003G219600 SobicK008450--Sobic003G219600 SobicK008450--Sobic006G125400 Sobic005G018500 Sobic005G018500 SobicK008450--Sobic005G018500 Sobic001G319350 Sobic001G319350 Sobic002G148000--Sobic001G319350 Sobic004G122300 Sobic004G122300 Sobic002G148000--Sobic004G122300 Sobic002G148000--Sobic009G067600 Sobic008G003300 Sobic008G003300 Sobic002G148000--Sobic008G003300 Sobic008G089800 Sobic008G089800 Sobic002G148000--Sobic008G089800 Sobic003G418733 Sobic003G418733 Sobic002G148000--Sobic003G418733 Sobic001G309800 Sobic001G309800 Sobic002G148000--Sobic001G309800 Sobic002G118101 Sobic002G118101 Sobic002G148000--Sobic002G118101 Sobic001G261750 Sobic001G261750 Sobic002G148000--Sobic001G261750 Sobic004G265800 Sobic004G265800 Sobic007G220000--Sobic004G265800 Sobic007G004500 Sobic007G004500 Sobic007G220000--Sobic007G004500 Sobic003G129600 Sobic003G129600 Sobic007G220000--Sobic003G129600 Sobic007G220000--Sobic003G059300 Sobic007G220000--Sobic003G320700 Sobic004G329300 Sobic004G329300 Sobic007G220000--Sobic004G329300 Sobic007G220000--Sobic006G146100 Sobic001G517800 Sobic001G517800 Sobic007G220000--Sobic001G517800 Sobic001G462500 Sobic001G462500 Sobic007G220000--Sobic001G462500
Octagon: transcription factors


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