Gene annotation
Transcriptome id Sobic.002G292100.2,Sobic.002G292100.4,Sobic.002G292100.1,Sobic.002G292100.3
Synonym Sb02g032330
Functional annotation auxin efflux carrier component, putative, expressed
UniProt A0A1B6QE27
Pfam PF03547
Panther DB PTHR31651 PTHR31651:SF3
NCBI CDD KOG2722; Predicted membrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G65980 : Auxin efflux carrier family protein
RAP-DB (Rice) LOC_Os09g38130.1 : auxin efflux carrier component, putative, expressed
MaizeGDB (Corn) Zm00025a047941 , Zm00025a036134
Brachypodium KQJ91400 , KQJ91401
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G292100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G193700 transmembrane protein 56, putative, expressed -
2 Sobic.002G352800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactose permease-related, putative, expressed -
3 Sobic.001G483500 DUF567 domain containing protein, putative, expressed -
4 Sobic.001G412700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
6 Sobic.004G304000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
7 Sobic.010G098100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
8 Sobic.001G212000 GEM, putative, expressed -
9 Sobic.009G211400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
10 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -
11 Sobic.005G152100 aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
12 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
13 Sobic.003G259200 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
14 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
15 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
16 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G269700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@SAM dependent carboxyl methyltransferase, putative, expressed -
18 Sobic.001G251900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
19 Sobic.001G162700 "phosphatidylinositol phosphatase, up-regulated under severe drought stress"(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed K01106: inositol-1,4,5-trisphosphate 5-phosphatase
20 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase


Gene co-expression network
sample Sobic002G292100 Sobic002G292100 Sobic009G193700 Sobic009G193700 Sobic002G292100--Sobic009G193700 Sobic002G352800 Sobic002G352800 Sobic002G292100--Sobic002G352800 Sobic001G483500 Sobic001G483500 Sobic002G292100--Sobic001G483500 Sobic001G412700 Sobic001G412700 Sobic002G292100--Sobic001G412700 Sobic009G029600 Sobic009G029600 Sobic002G292100--Sobic009G029600 Sobic004G304000 Sobic004G304000 Sobic002G292100--Sobic004G304000 Sobic010G098100 Sobic010G098100 Sobic002G292100--Sobic010G098100 Sobic001G212000 Sobic001G212000 Sobic002G292100--Sobic001G212000 Sobic009G211400 Sobic009G211400 Sobic002G292100--Sobic009G211400 Sobic010G107000 Sobic010G107000 Sobic009G193700--Sobic010G107000 Sobic008G062200 Sobic008G062200 Sobic009G193700--Sobic008G062200 Sobic009G193700--Sobic009G211400 Sobic003G355600 Sobic003G355600 Sobic009G193700--Sobic003G355600 Sobic009G193700--Sobic009G029600 Sobic004G260000 Sobic004G260000 Sobic009G193700--Sobic004G260000 Sobic003G219600 Sobic003G219600 Sobic009G193700--Sobic003G219600 Sobic006G199000 Sobic006G199000 Sobic009G193700--Sobic006G199000 Sobic001G089800 Sobic001G089800 Sobic009G193700--Sobic001G089800 Sobic003G257100 Sobic003G257100 Sobic002G352800--Sobic003G257100 Sobic006G204900 Sobic006G204900 Sobic002G352800--Sobic006G204900 Sobic003G320700 Sobic003G320700 Sobic002G352800--Sobic003G320700 Sobic002G352800--Sobic009G193700 Sobic002G352800--Sobic009G211400 Sobic002G352800--Sobic009G029600 Sobic002G352800--Sobic002G292100 Sobic002G352800--Sobic010G107000 Sobic002G352800--Sobic006G199000 Sobic001G483500--Sobic010G098100 Sobic005G151700 Sobic005G151700 Sobic001G483500--Sobic005G151700 Sobic004G006966 Sobic004G006966 Sobic001G483500--Sobic004G006966 Sobic001G101400 Sobic001G101400 Sobic001G483500--Sobic001G101400 Sobic001G251900 Sobic001G251900 Sobic001G483500--Sobic001G251900 Sobic004G255000 Sobic004G255000 Sobic001G412700--Sobic004G255000 Sobic003G259200 Sobic003G259200 Sobic001G412700--Sobic003G259200 Sobic005G152100 Sobic005G152100 Sobic001G412700--Sobic005G152100 Sobic003G269700 Sobic003G269700 Sobic001G412700--Sobic003G269700 Sobic004G246200 Sobic004G246200 Sobic001G412700--Sobic004G246200 Sobic001G412700--Sobic001G212000 Sobic001G412700--Sobic009G029600 Sobic002G322900 Sobic002G322900 Sobic001G412700--Sobic002G322900 Sobic005G018500 Sobic005G018500 Sobic001G412700--Sobic005G018500 Sobic009G029600--Sobic004G255000 Sobic001G280200 Sobic001G280200 Sobic009G029600--Sobic001G280200 Sobic009G029600--Sobic003G219600 Sobic001G249300 Sobic001G249300 Sobic009G029600--Sobic001G249300 Sobic009G029600--Sobic009G211400 Sobic006G030700 Sobic006G030700 Sobic009G029600--Sobic006G030700 Sobic009G054500 Sobic009G054500 Sobic009G029600--Sobic009G054500 Sobic002G215800 Sobic002G215800 Sobic009G029600--Sobic002G215800 Sobic009G226300 Sobic009G226300 Sobic009G029600--Sobic009G226300 Sobic004G304000--Sobic002G292100 Sobic004G304000--Sobic006G030700 Sobic001G162700 Sobic001G162700 Sobic004G304000--Sobic001G162700 Sobic004G304000--Sobic009G029600 Sobic002G011600 Sobic002G011600 Sobic004G304000--Sobic002G011600 Sobic004G304000--Sobic003G257100 Sobic004G304000--Sobic006G199000 Sobic003G398100 Sobic003G398100 Sobic004G304000--Sobic003G398100 Sobic001G150600 Sobic001G150600 Sobic004G304000--Sobic001G150600 Sobic010G098100--Sobic001G483500 Sobic010G098100--Sobic005G151700 Sobic010G098100--Sobic001G212000 Sobic010G098100--Sobic001G280200 Sobic010G098100--Sobic001G249300 Sobic010G098100--Sobic005G152100 Sobic010G098100--Sobic003G259200 Sobic007G187300 Sobic007G187300 Sobic010G098100--Sobic007G187300 Sobic010G098100--Sobic001G162700 Sobic001G212000--Sobic010G098100 Sobic003G085300 Sobic003G085300 Sobic001G212000--Sobic003G085300 Sobic001G212000--Sobic005G152100 Sobic001G212000--Sobic001G101400 Sobic001G212000--Sobic001G483500 Sobic001G212000--Sobic001G412700 Sobic001G212000--Sobic005G151700 Sobic008G024400 Sobic008G024400 Sobic001G212000--Sobic008G024400 Sobic004G236600 Sobic004G236600 Sobic001G212000--Sobic004G236600 Sobic009G211400--Sobic003G219600 Sobic009G211400--Sobic010G107000 Sobic009G211400--Sobic009G029600 Sobic003G138200 Sobic003G138200 Sobic009G211400--Sobic003G138200 Sobic009G211400--Sobic004G260000 Sobic009G211400--Sobic002G215800 Sobic009G211400--Sobic009G054500 Sobic009G211400--Sobic009G193700 Sobic009G211400--Sobic005G018500
Octagon: transcription factors


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