Gene annotation
Transcriptome id Sobic.007G060000.1
Synonym Sb07g004780
Functional annotation octicosapeptide/Phox/Bem1p, putative, expressed
UniProt C5YHV6
Pfam PF13414 PF00564
Panther DB PTHR22904 PTHR22904:SF332
NCBI CDD KOG4151; Myosin assembly protein/sexual cycle protein and related proteins
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G25290 : Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
RAP-DB (Rice) LOC_Os08g20020.1 : octicosapeptide/Phox/Bem1p, putative, expressed
MaizeGDB (Corn) Zm00025a055001
Brachypodium KQJ95968
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G004500 arginase, putative, expressed K01476: E3.5.3.1, rocF, arginase
2 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
3 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
5 Sobic.006G126500 OsFBX146 - F-box domain containing protein, expressed -
6 Sobic.001G305500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G346400 transmembrane protein 49, putative, expressed -
8 Sobic.003G089000 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
9 Sobic.002G058500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD-linked oxidoreductase protein, putative, expressed K18204: D-2-hydroxyglutarate dehydrogenase
10 Sobic.003G317500 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
11 Sobic.001G517800 NIN, putative, expressed -
12 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
13 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
14 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
15 Sobic.001G375600 transmembrane protein, putative, expressed -
16 Sobic.006G125400 steroid nuclear receptor, ligand-binding, putative, expressed -
17 Sobic.006G115600 expressed protein -
18 Sobic.001G282600 transporter family protein, putative, expressed -
19 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
20 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic007G060000 Sobic007G060000 Sobic006G004500 Sobic006G004500 Sobic007G060000--Sobic006G004500 Sobic001G436900 Sobic001G436900 Sobic007G060000--Sobic001G436900 Sobic003G320700 Sobic003G320700 Sobic007G060000--Sobic003G320700 Sobic006G204900 Sobic006G204900 Sobic007G060000--Sobic006G204900 Sobic006G126500 Sobic006G126500 Sobic007G060000--Sobic006G126500 Sobic001G305500 Sobic001G305500 Sobic007G060000--Sobic001G305500 Sobic002G346400 Sobic002G346400 Sobic007G060000--Sobic002G346400 Sobic003G089000 Sobic003G089000 Sobic007G060000--Sobic003G089000 Sobic002G058500 Sobic002G058500 Sobic007G060000--Sobic002G058500 Sobic004G237400 Sobic004G237400 Sobic006G004500--Sobic004G237400 Sobic006G004500--Sobic001G436900 Sobic006G004500--Sobic003G089000 Sobic006G004500--Sobic002G058500 Sobic002G105200 Sobic002G105200 Sobic006G004500--Sobic002G105200 Sobic007G028100 Sobic007G028100 Sobic006G004500--Sobic007G028100 Sobic007G000200 Sobic007G000200 Sobic006G004500--Sobic007G000200 Sobic009G113000 Sobic009G113000 Sobic006G004500--Sobic009G113000 Sobic006G004500--Sobic007G060000 Sobic004G331100 Sobic004G331100 Sobic001G436900--Sobic004G331100 Sobic001G436900--Sobic003G320700 Sobic004G065000 Sobic004G065000 Sobic001G436900--Sobic004G065000 Sobic006G271200 Sobic006G271200 Sobic001G436900--Sobic006G271200 Sobic001G436900--Sobic006G204900 Sobic007G075400 Sobic007G075400 Sobic001G436900--Sobic007G075400 Sobic001G436900--Sobic009G113000 Sobic002G382600 Sobic002G382600 Sobic001G436900--Sobic002G382600 Sobic010G264200 Sobic010G264200 Sobic001G436900--Sobic010G264200 Sobic003G301900 Sobic003G301900 Sobic003G320700--Sobic003G301900 Sobic006G104600 Sobic006G104600 Sobic003G320700--Sobic006G104600 Sobic001G517800 Sobic001G517800 Sobic003G320700--Sobic001G517800 Sobic003G320700--Sobic001G436900 Sobic003G320700--Sobic007G075400 Sobic003G320700--Sobic006G204900 Sobic006G087700 Sobic006G087700 Sobic003G320700--Sobic006G087700 Sobic003G322700 Sobic003G322700 Sobic003G320700--Sobic003G322700 Sobic009G193700 Sobic009G193700 Sobic003G320700--Sobic009G193700 Sobic006G204900--Sobic003G322700 Sobic001G207400 Sobic001G207400 Sobic006G204900--Sobic001G207400 Sobic004G269200 Sobic004G269200 Sobic006G204900--Sobic004G269200 Sobic009G133500 Sobic009G133500 Sobic006G204900--Sobic009G133500 Sobic010G001500 Sobic010G001500 Sobic006G204900--Sobic010G001500 Sobic004G068400 Sobic004G068400 Sobic006G204900--Sobic004G068400 Sobic004G355000 Sobic004G355000 Sobic006G204900--Sobic004G355000 Sobic006G204900--Sobic003G320700 Sobic002G430000 Sobic002G430000 Sobic006G204900--Sobic002G430000 Sobic007G172200 Sobic007G172200 Sobic006G126500--Sobic007G172200 Sobic006G126500--Sobic006G204900 Sobic006G126500--Sobic007G075400 Sobic010G072400 Sobic010G072400 Sobic006G126500--Sobic010G072400 Sobic001G370900 Sobic001G370900 Sobic006G126500--Sobic001G370900 Sobic006G126500--Sobic004G331100 Sobic007G088100 Sobic007G088100 Sobic006G126500--Sobic007G088100 Sobic006G126500--Sobic004G269200 Sobic001G375600 Sobic001G375600 Sobic006G126500--Sobic001G375600 Sobic001G305500--Sobic006G104600 Sobic002G262300 Sobic002G262300 Sobic001G305500--Sobic002G262300 Sobic001G305500--Sobic001G207400 Sobic003G398100 Sobic003G398100 Sobic001G305500--Sobic003G398100 Sobic002G266000 Sobic002G266000 Sobic001G305500--Sobic002G266000 Sobic001G305500--Sobic006G087700 Sobic004G314700 Sobic004G314700 Sobic001G305500--Sobic004G314700 Sobic007G210500 Sobic007G210500 Sobic001G305500--Sobic007G210500 Sobic006G199000 Sobic006G199000 Sobic001G305500--Sobic006G199000 Sobic002G346400--Sobic001G436900 Sobic010G072800 Sobic010G072800 Sobic002G346400--Sobic010G072800 Sobic008G144900 Sobic008G144900 Sobic002G346400--Sobic008G144900 Sobic001G430400 Sobic001G430400 Sobic002G346400--Sobic001G430400 Sobic002G346400--Sobic006G126500 Sobic002G346400--Sobic003G089000 Sobic003G246100 Sobic003G246100 Sobic002G346400--Sobic003G246100 Sobic002G346400--Sobic007G000200 Sobic002G346400--Sobic006G004500 Sobic004G177300 Sobic004G177300 Sobic003G089000--Sobic004G177300 Sobic006G032300 Sobic006G032300 Sobic003G089000--Sobic006G032300 Sobic002G335600 Sobic002G335600 Sobic003G089000--Sobic002G335600 Sobic003G089000--Sobic010G072800 Sobic001G273700 Sobic001G273700 Sobic003G089000--Sobic001G273700 Sobic002G142900 Sobic002G142900 Sobic003G089000--Sobic002G142900 Sobic001G263600 Sobic001G263600 Sobic003G089000--Sobic001G263600 Sobic003G089000--Sobic001G375600 Sobic003G089000--Sobic007G000200 Sobic006G139000 Sobic006G139000 Sobic002G058500--Sobic006G139000 Sobic001G227800 Sobic001G227800 Sobic002G058500--Sobic001G227800 Sobic001G395700 Sobic001G395700 Sobic002G058500--Sobic001G395700 Sobic005G019800 Sobic005G019800 Sobic002G058500--Sobic005G019800 Sobic002G215700 Sobic002G215700 Sobic002G058500--Sobic002G215700 Sobic004G101900 Sobic004G101900 Sobic002G058500--Sobic004G101900 Sobic003G226200 Sobic003G226200 Sobic002G058500--Sobic003G226200 Sobic004G124200 Sobic004G124200 Sobic002G058500--Sobic004G124200 Sobic001G280000 Sobic001G280000 Sobic002G058500--Sobic001G280000
Octagon: transcription factors


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