Gene annotation
Transcriptome id Sobic.003G235300.1
Synonym Sb03g029270
Functional annotation AAA family ATPase, putative, expressed
UniProt C5XF39
Pfam PF14363 PF00004
Panther DB PTHR23070 PTHR23070:SF34
NCBI CDD KOG0743; AAA+-type ATPase
KEGG Orthology -
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT5G17760 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g45450.1 : AAA family ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a038672
Brachypodium KQK08934
Barley HORVU3Hr1G057540.4 , HORVU3Hr1G057540.5 , HORVU3Hr1G057540.7 , HORVU3Hr1G057540.2 , HORVU3Hr1G057540.3 , HORVU3Hr1G057540.1
Wheat TraesCS3B02G260200 , TraesCS3A02G230900 , TraesCS3A02G230900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G031000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ferroportin1 domain containing protein, expressed -
2 Sobic.007G045800 serine/threonine-protein kinase receptor precursor, putative, expressed -
3 Sobic.001G180500 expressed protein -
4 Sobic.005G077532 - -
5 Sobic.009G236500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G208300 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
7 Sobic.002G180501 - -
8 Sobic.003G294000 protein kinase domain containing protein, expressed -
9 Sobic.009G039400 jacalin-like lectin domain containing protein, expressed -
10 Sobic.003G265300 lectin-like receptor kinase, putative, expressed -
11 Sobic.009G151500 cinnamoyl-CoA reductase-related, putative, expressed -
12 Sobic.008G065100 - -
13 Sobic.002G206000 BT1 family protein, putative, expressed -
14 Sobic.004G279150 - -
15 Sobic.003G337700 WRKY20, expressed -
16 Sobic.008G152100 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.004G007032 - -
18 Sobic.008G015000 cytochrome P450, putative, expressed -
19 Sobic.002G121701 - -
20 Sobic.006G167200 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -


Gene co-expression network
sample Sobic003G235300 Sobic003G235300 Sobic009G031000 Sobic009G031000 Sobic003G235300--Sobic009G031000 Sobic007G045800 Sobic007G045800 Sobic003G235300--Sobic007G045800 Sobic001G180500 Sobic001G180500 Sobic003G235300--Sobic001G180500 Sobic005G077532 Sobic005G077532 Sobic003G235300--Sobic005G077532 Sobic009G236500 Sobic009G236500 Sobic003G235300--Sobic009G236500 Sobic010G208300 Sobic010G208300 Sobic003G235300--Sobic010G208300 Sobic002G180501 Sobic002G180501 Sobic003G235300--Sobic002G180501 Sobic003G294000 Sobic003G294000 Sobic003G235300--Sobic003G294000 Sobic009G039400 Sobic009G039400 Sobic003G235300--Sobic009G039400 Sobic004G007032 Sobic004G007032 Sobic009G031000--Sobic004G007032 Sobic009G031000--Sobic007G045800 Sobic009G031000--Sobic003G235300 Sobic002G121701 Sobic002G121701 Sobic009G031000--Sobic002G121701 Sobic003G265300 Sobic003G265300 Sobic009G031000--Sobic003G265300 Sobic002G120250 Sobic002G120250 Sobic009G031000--Sobic002G120250 Sobic003G337700 Sobic003G337700 Sobic009G031000--Sobic003G337700 Sobic009G031000--Sobic001G180500 Sobic009G031000--Sobic010G208300 Sobic008G152100 Sobic008G152100 Sobic007G045800--Sobic008G152100 Sobic009G151500 Sobic009G151500 Sobic007G045800--Sobic009G151500 Sobic007G045800--Sobic005G077532 Sobic007G045800--Sobic001G180500 Sobic010G009532 Sobic010G009532 Sobic007G045800--Sobic010G009532 Sobic001G214400 Sobic001G214400 Sobic007G045800--Sobic001G214400 Sobic007G045800--Sobic009G031000 Sobic007G045800--Sobic003G294000 Sobic007G045800--Sobic003G235300 Sobic001G180500--Sobic005G077532 Sobic004G230500 Sobic004G230500 Sobic001G180500--Sobic004G230500 Sobic001G180500--Sobic008G152100 Sobic001G180500--Sobic007G045800 Sobic006G167200 Sobic006G167200 Sobic001G180500--Sobic006G167200 Sobic001G180500--Sobic009G039400 Sobic006G019901 Sobic006G019901 Sobic001G180500--Sobic006G019901 Sobic004G132700 Sobic004G132700 Sobic001G180500--Sobic004G132700 Sobic004G279150 Sobic004G279150 Sobic001G180500--Sobic004G279150 Sobic005G077532--Sobic008G152100 Sobic001G501500 Sobic001G501500 Sobic005G077532--Sobic001G501500 Sobic005G077532--Sobic004G230500 Sobic006G181150 Sobic006G181150 Sobic005G077532--Sobic006G181150 Sobic005G077532--Sobic010G009532 Sobic005G077532--Sobic001G180500 Sobic001G541166 Sobic001G541166 Sobic005G077532--Sobic001G541166 Sobic005G077532--Sobic007G045800 Sobic003G385800 Sobic003G385800 Sobic005G077532--Sobic003G385800 Sobic009G236500--Sobic003G337700 Sobic004G224300 Sobic004G224300 Sobic009G236500--Sobic004G224300 Sobic004G089700 Sobic004G089700 Sobic009G236500--Sobic004G089700 Sobic002G339250 Sobic002G339250 Sobic009G236500--Sobic002G339250 Sobic005G209800 Sobic005G209800 Sobic009G236500--Sobic005G209800 Sobic001G457100 Sobic001G457100 Sobic009G236500--Sobic001G457100 Sobic010G002850 Sobic010G002850 Sobic009G236500--Sobic010G002850 Sobic002G048250 Sobic002G048250 Sobic009G236500--Sobic002G048250 Sobic004G226300 Sobic004G226300 Sobic009G236500--Sobic004G226300 Sobic010G208300--Sobic009G039400 Sobic010G029200 Sobic010G029200 Sobic010G208300--Sobic010G029200 Sobic010G068300 Sobic010G068300 Sobic010G208300--Sobic010G068300 Sobic003G142900 Sobic003G142900 Sobic010G208300--Sobic003G142900 Sobic010G045300 Sobic010G045300 Sobic010G208300--Sobic010G045300 Sobic003G081400 Sobic003G081400 Sobic010G208300--Sobic003G081400 Sobic006G133650 Sobic006G133650 Sobic010G208300--Sobic006G133650 Sobic004G069600 Sobic004G069600 Sobic010G208300--Sobic004G069600 Sobic005G022600 Sobic005G022600 Sobic010G208300--Sobic005G022600 Sobic001G481201 Sobic001G481201 Sobic002G180501--Sobic001G481201 Sobic002G180501--Sobic006G167200 Sobic002G180501--Sobic004G279150 Sobic002G180501--Sobic003G081400 Sobic002G180501--Sobic006G019901 Sobic002G180501--Sobic010G208300 Sobic002G180501--Sobic003G294000 Sobic002G180501--Sobic009G039400 Sobic009G127600 Sobic009G127600 Sobic002G180501--Sobic009G127600 Sobic003G294000--Sobic004G279150 Sobic002G245600 Sobic002G245600 Sobic003G294000--Sobic002G245600 Sobic009G094000 Sobic009G094000 Sobic003G294000--Sobic009G094000 Sobic003G294000--Sobic002G180501 Sobic003G294000--Sobic006G167200 Sobic003G294000--Sobic009G127600 Sobic003G294000--Sobic006G019901 Sobic002G165401 Sobic002G165401 Sobic003G294000--Sobic002G165401 Sobic003G294000--Sobic001G481201 Sobic009G039400--Sobic010G208300 Sobic009G039400--Sobic010G029200 Sobic009G039400--Sobic006G133650 Sobic009G039400--Sobic010G045300 Sobic009G039400--Sobic003G081400 Sobic009G039400--Sobic004G069600 Sobic002G188100 Sobic002G188100 Sobic009G039400--Sobic002G188100 Sobic009G039400--Sobic006G167200 Sobic009G039400--Sobic010G068300
Octagon: transcription factors


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