Gene annotation
Transcriptome id Sobic.003G393001.1
Synonym -
Functional annotation -
UniProt A0A1W0W116
Pfam PF06155
Panther DB PTHR35303
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27340 : -
RAP-DB (Rice) LOC_Os02g10430.1 : 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a026382
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G213200 ZOS10-05 - C2H2 zinc finger protein, expressed -
2 Sobic.009G211500 - -
3 Sobic.008G113400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G354900 - -
5 Sobic.006G210600 expressed protein -
6 Sobic.010G215201 - -
7 Sobic.002G152400 - -
8 Sobic.004G190300 expressed protein -
9 Sobic.005G150250 - -
10 Sobic.006G155400 expressed protein -
11 Sobic.002G187350 - -
12 Sobic.002G132201 - -
13 Sobic.010G081600 cytokinin-O-glucosyltransferase 3, putative, expressed -
14 Sobic.005G073300 limonoid UDP-glucosyltransferase, putative, expressed -
15 Sobic.001G421100 - -
16 Sobic.003G149700 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
17 Sobic.009G173400 DUF623 domain containing protein, expressed -
18 Sobic.003G356500 "uncharacterized lipid transporters, up-regulated under drought stress, mapped into a QTL involved in pre-flowering drought tolerance (QSTG2_4)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL101 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.006G222200 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.002G054800 "O2(Ortholog in maize:Hartings et al., 1989)"(PubMedID : 31659852)@bZIP transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic003G393001 Sobic003G393001 Sobic001G213200 Sobic001G213200 Sobic003G393001--Sobic001G213200 Sobic009G211500 Sobic009G211500 Sobic003G393001--Sobic009G211500 Sobic008G113400 Sobic008G113400 Sobic003G393001--Sobic008G113400 Sobic001G354900 Sobic001G354900 Sobic003G393001--Sobic001G354900 Sobic006G210600 Sobic006G210600 Sobic003G393001--Sobic006G210600 Sobic010G215201 Sobic010G215201 Sobic003G393001--Sobic010G215201 Sobic002G152400 Sobic002G152400 Sobic003G393001--Sobic002G152400 Sobic004G190300 Sobic004G190300 Sobic003G393001--Sobic004G190300 Sobic005G150250 Sobic005G150250 Sobic003G393001--Sobic005G150250 Sobic003G073620 Sobic003G073620 Sobic001G213200--Sobic003G073620 Sobic001G075900 Sobic001G075900 Sobic001G213200--Sobic001G075900 Sobic001G213200--Sobic001G354900 Sobic002G202200 Sobic002G202200 Sobic001G213200--Sobic002G202200 Sobic001G391000 Sobic001G391000 Sobic001G213200--Sobic001G391000 Sobic009G242032 Sobic009G242032 Sobic001G213200--Sobic009G242032 Sobic005G066800 Sobic005G066800 Sobic001G213200--Sobic005G066800 Sobic004G221150 Sobic004G221150 Sobic001G213200--Sobic004G221150 Sobic003G265300 Sobic003G265300 Sobic001G213200--Sobic003G265300 Sobic006G270300 Sobic006G270300 Sobic009G211500--Sobic006G270300 Sobic006G161200 Sobic006G161200 Sobic009G211500--Sobic006G161200 Sobic003G337900 Sobic003G337900 Sobic009G211500--Sobic003G337900 Sobic006G111400 Sobic006G111400 Sobic009G211500--Sobic006G111400 Sobic005G205100 Sobic005G205100 Sobic009G211500--Sobic005G205100 Sobic008G007100 Sobic008G007100 Sobic009G211500--Sobic008G007100 Sobic009G211500--Sobic010G215201 Sobic009G211500--Sobic004G190300 Sobic003G150700 Sobic003G150700 Sobic009G211500--Sobic003G150700 Sobic009G173400 Sobic009G173400 Sobic008G113400--Sobic009G173400 Sobic001G298100 Sobic001G298100 Sobic008G113400--Sobic001G298100 Sobic008G113400--Sobic001G354900 Sobic004G063750 Sobic004G063750 Sobic008G113400--Sobic004G063750 Sobic008G113400--Sobic009G211500 Sobic001G431200 Sobic001G431200 Sobic008G113400--Sobic001G431200 Sobic002G295000 Sobic002G295000 Sobic008G113400--Sobic002G295000 Sobic008G113400--Sobic001G213200 Sobic008G113400--Sobic003G393001 Sobic001G354900--Sobic001G213200 Sobic001G354900--Sobic001G075900 Sobic001G354900--Sobic003G073620 Sobic001G536300 Sobic001G536300 Sobic001G354900--Sobic001G536300 Sobic002G268200 Sobic002G268200 Sobic001G354900--Sobic002G268200 Sobic001G523500 Sobic001G523500 Sobic001G354900--Sobic001G523500 Sobic001G084300 Sobic001G084300 Sobic001G354900--Sobic001G084300 Sobic001G354900--Sobic002G202200 Sobic001G354900--Sobic004G221150 Sobic002G240300 Sobic002G240300 Sobic006G210600--Sobic002G240300 Sobic006G155400 Sobic006G155400 Sobic006G210600--Sobic006G155400 Sobic006G210600--Sobic005G150250 Sobic002G132201 Sobic002G132201 Sobic006G210600--Sobic002G132201 Sobic009G022600 Sobic009G022600 Sobic006G210600--Sobic009G022600 Sobic005G073300 Sobic005G073300 Sobic006G210600--Sobic005G073300 Sobic003G149700 Sobic003G149700 Sobic006G210600--Sobic003G149700 Sobic002G054800 Sobic002G054800 Sobic006G210600--Sobic002G054800 Sobic006G210600--Sobic010G215201 Sobic010G215201--Sobic002G054800 Sobic001G071500 Sobic001G071500 Sobic010G215201--Sobic001G071500 Sobic002G240200 Sobic002G240200 Sobic010G215201--Sobic002G240200 Sobic010G215201--Sobic005G073300 Sobic008G030801 Sobic008G030801 Sobic010G215201--Sobic008G030801 Sobic010G215201--Sobic002G132201 Sobic002G172300 Sobic002G172300 Sobic010G215201--Sobic002G172300 Sobic001G371650 Sobic001G371650 Sobic010G215201--Sobic001G371650 Sobic001G421100 Sobic001G421100 Sobic010G215201--Sobic001G421100 Sobic002G269700 Sobic002G269700 Sobic002G152400--Sobic002G269700 Sobic005G199500 Sobic005G199500 Sobic002G152400--Sobic005G199500 Sobic006G018500 Sobic006G018500 Sobic002G152400--Sobic006G018500 Sobic007G069750 Sobic007G069750 Sobic002G152400--Sobic007G069750 Sobic002G213050 Sobic002G213050 Sobic002G152400--Sobic002G213050 Sobic010G129900 Sobic010G129900 Sobic002G152400--Sobic010G129900 Sobic001G418300 Sobic001G418300 Sobic002G152400--Sobic001G418300 Sobic004G055400 Sobic004G055400 Sobic002G152400--Sobic004G055400 Sobic006G196700 Sobic006G196700 Sobic002G152400--Sobic006G196700 Sobic004G190300--Sobic006G210600 Sobic004G190300--Sobic002G132201 Sobic004G190300--Sobic010G215201 Sobic004G190300--Sobic006G161200 Sobic004G190300--Sobic005G073300 Sobic004G190300--Sobic002G054800 Sobic004G190300--Sobic003G149700 Sobic003G356500 Sobic003G356500 Sobic004G190300--Sobic003G356500 Sobic001G380100 Sobic001G380100 Sobic004G190300--Sobic001G380100 Sobic005G150250--Sobic006G155400 Sobic005G150250--Sobic003G149700 Sobic006G222200 Sobic006G222200 Sobic005G150250--Sobic006G222200 Sobic005G150250--Sobic002G132201 Sobic005G150250--Sobic003G356500 Sobic005G150250--Sobic009G022600 Sobic003G193900 Sobic003G193900 Sobic005G150250--Sobic003G193900 Sobic005G150250--Sobic005G073300 Sobic005G150250--Sobic006G210600
Octagon: transcription factors


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