Gene annotation
Transcriptome id Sobic.004G265200.2,Sobic.004G265200.1
Synonym Sb04g030330
Functional annotation ZOS2-16 - C2H2 zinc finger protein, expressed
UniProt C5Y095 , A0A1Z5RPR1
Pfam PF00929
Panther DB PTHR12801 PTHR12801:SF56
NCBI CDD KOG2249; 3'-5' exonuclease
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27970 : Exonuclease family protein
RAP-DB (Rice) LOC_Os02g47920.1 : ZOS2-16 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a021753
Brachypodium PNT69294 , KQK00966
Barley HORVU4Hr1G083140.2 , HORVU6Hr1G069340.2 , HORVU6Hr1G069340.1 , HORVU4Hr1G083140.1
Wheat TraesCS6B02G302200 , TraesCS6D02G255000 , TraesCS6A02G274700 , TraesCS4B02G319600
Populus -


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cDNA sequences
Sobic.004G265200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G108100 - -
2 Sobic.003G267150 - -
3 Sobic.005G041150 - -
4 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
5 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
6 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
7 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
8 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
9 Sobic.009G115800 REX1 DNA Repair family protein, expressed K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
10 Sobic.004G262550 - -
11 Sobic.004G313000 leucine rich repeat containing protein, expressed -
12 Sobic.003G389150 - -
13 Sobic.009G091940 - -
14 Sobic.002G319900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
15 Sobic.003G261766 - -
16 Sobic.006G135550 - -
17 Sobic.006G159500 serpin domain containing protein, putative, expressed K13963: serpin B
18 Sobic.005G216833 - -
19 Sobic.009G134700 - -
20 Sobic.004G149150 - -


Gene co-expression network
sample Sobic004G265200 Sobic004G265200 Sobic008G108100 Sobic008G108100 Sobic004G265200--Sobic008G108100 Sobic003G267150 Sobic003G267150 Sobic004G265200--Sobic003G267150 Sobic005G041150 Sobic005G041150 Sobic004G265200--Sobic005G041150 Sobic002G160500 Sobic002G160500 Sobic004G265200--Sobic002G160500 Sobic009G115800 Sobic009G115800 Sobic004G265200--Sobic009G115800 Sobic008G108100--Sobic003G267150 Sobic008G108100--Sobic009G115800 Sobic008G108100--Sobic002G160500 Sobic004G313000 Sobic004G313000 Sobic008G108100--Sobic004G313000 Sobic004G262550 Sobic004G262550 Sobic008G108100--Sobic004G262550 Sobic003G267150--Sobic002G160500 Sobic003G267150--Sobic004G262550 Sobic009G091940 Sobic009G091940 Sobic003G267150--Sobic009G091940 Sobic003G267150--Sobic004G313000 Sobic003G389150 Sobic003G389150 Sobic003G267150--Sobic003G389150 Sobic005G041150--Sobic009G115800 Sobic003G261766 Sobic003G261766 Sobic005G041150--Sobic003G261766 Sobic009G134700 Sobic009G134700 Sobic005G041150--Sobic009G134700 Sobic006G099400 Sobic006G099400 Sobic005G041150--Sobic006G099400 Sobic006G159500 Sobic006G159500 Sobic005G041150--Sobic006G159500 Sobic005G116800 Sobic005G116800 Sobic005G041150--Sobic005G116800 Sobic006G083050 Sobic006G083050 Sobic005G041150--Sobic006G083050 Sobic005G041150--Sobic008G108100 Sobic006G135550 Sobic006G135550 Sobic005G041150--Sobic006G135550 Sobic002G160500--Sobic002G160500 Sobic002G160500--Sobic003G267150 Sobic002G160500--Sobic004G262550 Sobic002G160500--Sobic009G091940 Sobic002G160500--Sobic003G389150 Sobic002G160500--Sobic004G313000 Sobic009G115800--Sobic003G261766 Sobic009G115800--Sobic006G159500 Sobic005G216833 Sobic005G216833 Sobic009G115800--Sobic005G216833 Sobic009G115800--Sobic008G108100 Sobic009G115800--Sobic005G041150 Sobic009G115800--Sobic004G313000 Sobic009G115800--Sobic003G267150 Sobic002G319900 Sobic002G319900 Sobic009G115800--Sobic002G319900 Sobic009G115800--Sobic002G160500
Octagon: transcription factors


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