Gene annotation
Transcriptome id Sobic.005G000400.1
Synonym Sb05g000230
Functional annotation RNase P subunit p30, putative, expressed
UniProt C5Y2M0
Pfam PF06203
Panther DB PTHR31319 PTHR31319:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G41380 : CCT motif family protein
RAP-DB (Rice) LOC_Os11g01074.4 : RNase P subunit p30, putative, expressed
MaizeGDB (Corn) Zm00025a027936 , Zm00025a028907 , Zm00025a003663
Brachypodium -
Barley HORVU4Hr1G024330.1
Wheat TraesCS5D02G162800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G143800 expressed protein -
2 Sobic.003G267400 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.010G135450 - -
4 Sobic.010G263151 - -
5 Sobic.007G003250 - -
6 Sobic.006G196800 OsFBX177 - F-box domain containing protein, expressed -
7 Sobic.001G209000 secretory protein, putative, expressed -
8 Sobic.003G419100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MSP domain containing protein, putative, expressed -
9 Sobic.001G355850 - -
10 Sobic.005G050700 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
11 Sobic.003G008400 acetyltransferase, GNAT family protein, expressed -
12 Sobic.005G230800 SCARECROW, putative, expressed -
13 Sobic.003G254400 expressed protein -
14 Sobic.006G007700 CAS1 domain-containing protein 1 precursor, putative, expressed -
15 Sobic.003G188700 expressed protein -
16 Sobic.003G318600 - -
17 Sobic.010G165925 - -
18 Sobic.003G440100 EF hand family protein, expressed -
19 Sobic.005G080075 - -
20 Sobic.003G360500 glycosyl transferase, putative, expressed K00750: GYG1, glycogenin


Gene co-expression network
sample Sobic005G000400 Sobic005G000400 Sobic005G143800 Sobic005G143800 Sobic005G000400--Sobic005G143800 Sobic003G267400 Sobic003G267400 Sobic005G000400--Sobic003G267400 Sobic010G135450 Sobic010G135450 Sobic005G000400--Sobic010G135450 Sobic010G263151 Sobic010G263151 Sobic005G000400--Sobic010G263151 Sobic007G003250 Sobic007G003250 Sobic005G000400--Sobic007G003250 Sobic006G196800 Sobic006G196800 Sobic005G000400--Sobic006G196800 Sobic001G209000 Sobic001G209000 Sobic005G000400--Sobic001G209000 Sobic003G419100 Sobic003G419100 Sobic005G000400--Sobic003G419100 Sobic001G355850 Sobic001G355850 Sobic005G000400--Sobic001G355850 Sobic003G008400 Sobic003G008400 Sobic005G143800--Sobic003G008400 Sobic003G254400 Sobic003G254400 Sobic005G143800--Sobic003G254400 Sobic005G080075 Sobic005G080075 Sobic005G143800--Sobic005G080075 Sobic001G100650 Sobic001G100650 Sobic005G143800--Sobic001G100650 Sobic010G064050 Sobic010G064050 Sobic005G143800--Sobic010G064050 Sobic003G318600 Sobic003G318600 Sobic005G143800--Sobic003G318600 Sobic003G360500 Sobic003G360500 Sobic005G143800--Sobic003G360500 Sobic002G082350 Sobic002G082350 Sobic005G143800--Sobic002G082350 Sobic009G073200 Sobic009G073200 Sobic005G143800--Sobic009G073200 Sobic003G267400--Sobic010G263151 Sobic003G267400--Sobic006G196800 Sobic003G267400--Sobic001G209000 Sobic003G188700 Sobic003G188700 Sobic003G267400--Sobic003G188700 Sobic010G165925 Sobic010G165925 Sobic003G267400--Sobic010G165925 Sobic003G267400--Sobic003G419100 Sobic007G203600 Sobic007G203600 Sobic003G267400--Sobic007G203600 Sobic003G267400--Sobic007G003250 Sobic006G007700 Sobic006G007700 Sobic003G267400--Sobic006G007700 Sobic010G135450--Sobic005G143800 Sobic001G101650 Sobic001G101650 Sobic010G135450--Sobic001G101650 Sobic010G135450--Sobic003G254400 Sobic010G135450--Sobic003G008400 Sobic010G135450--Sobic005G080075 Sobic010G135450--Sobic001G100650 Sobic010G135450--Sobic010G064050 Sobic002G313850 Sobic002G313850 Sobic010G135450--Sobic002G313850 Sobic010G135450--Sobic002G082350 Sobic010G263151--Sobic006G196800 Sobic010G263151--Sobic003G267400 Sobic010G263151--Sobic003G188700 Sobic010G263151--Sobic003G419100 Sobic010G263151--Sobic001G209000 Sobic010G263151--Sobic010G165925 Sobic010G263151--Sobic006G007700 Sobic010G263151--Sobic001G355850 Sobic010G263151--Sobic007G203600 Sobic007G003250--Sobic010G165925 Sobic001G369701 Sobic001G369701 Sobic007G003250--Sobic001G369701 Sobic005G107250 Sobic005G107250 Sobic007G003250--Sobic005G107250 Sobic002G142550 Sobic002G142550 Sobic007G003250--Sobic002G142550 Sobic003G025500 Sobic003G025500 Sobic007G003250--Sobic003G025500 Sobic007G003250--Sobic006G196800 Sobic001G115200 Sobic001G115200 Sobic007G003250--Sobic001G115200 Sobic010G180300 Sobic010G180300 Sobic007G003250--Sobic010G180300 Sobic007G003250--Sobic010G263151 Sobic006G196800--Sobic010G263151 Sobic006G196800--Sobic010G165925 Sobic006G196800--Sobic007G003250 Sobic006G196800--Sobic001G369701 Sobic006G196800--Sobic003G188700 Sobic006G196800--Sobic003G267400 Sobic006G196800--Sobic006G007700 Sobic006G196800--Sobic003G419100 Sobic006G196800--Sobic002G142550 Sobic001G209000--Sobic010G263151 Sobic001G209000--Sobic003G267400 Sobic001G209000--Sobic001G355850 Sobic001G209000--Sobic006G196800 Sobic001G209000--Sobic003G419100 Sobic001G209000--Sobic003G188700 Sobic001G209000--Sobic003G008400 Sobic001G209000--Sobic003G254400 Sobic001G209000--Sobic003G318600 Sobic003G419100--Sobic010G263151 Sobic003G419100--Sobic006G196800 Sobic003G419100--Sobic003G267400 Sobic008G060400 Sobic008G060400 Sobic003G419100--Sobic008G060400 Sobic003G419100--Sobic010G165925 Sobic003G419100--Sobic001G209000 Sobic003G419100--Sobic003G188700 Sobic003G419100--Sobic007G003250 Sobic003G419100--Sobic001G355850 Sobic001G355850--Sobic010G263151 Sobic001G355850--Sobic001G209000 Sobic001G355850--Sobic006G196800 Sobic001G355850--Sobic003G254400 Sobic001G355850--Sobic003G008400 Sobic001G355850--Sobic003G267400 Sobic001G355850--Sobic003G318600 Sobic001G355850--Sobic003G419100 Sobic001G355850--Sobic008G060400
Octagon: transcription factors


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