Gene annotation
Transcriptome id Sobic.005G047700.3,Sobic.005G047700.2
Synonym Sb05g003920, RPS3, RPM1
Functional annotation NBS-LRR disease resistance protein, putative, expressed
UniProt A0A1Z5RHV5
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF556
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os06g17880.1 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G006980.16 , HORVU7Hr1G006980.6 , HORVU7Hr1G006980.7 , HORVU7Hr1G006980.4 , HORVU7Hr1G006980.5 , HORVU7Hr1G006980.2 , HORVU7Hr1G006980.3 , HORVU7Hr1G006980.1 , HORVU7Hr1G006980.9 , HORVU7Hr1G006980.14 , HORVU7Hr1G006980.15 , HORVU7Hr1G006980.10 , HORVU7Hr1G006980.11 , HORVU7Hr1G006980.12 , HORVU7Hr1G006980.13
Wheat TraesCS7D02G035900 , TraesCS4A02G448600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G062701 - -
2 Sobic.005G133750 - -
3 Sobic.006G247200 AMP-binding enzyme, putative, expressed -
4 Sobic.002G202050 - -
5 Sobic.002G202050 - -
6 Sobic.002G202050 - -
7 Sobic.002G202050 - -
8 Sobic.010G194801 - -
9 Sobic.003G260050 - -
10 Sobic.003G111700 - -
11 Sobic.010G143666 - -
12 Sobic.002G344800 - -
13 Sobic.004G178550 - -
14 Sobic.002G014100 OsFBX212 - F-box domain containing protein, expressed -
15 Sobic.002G382200 - -
16 Sobic.003G281000 - -
17 Sobic.007G116700 dehydrogenase, putative, expressed K18980: EO, 2-methylene-furan-3-one reductase
18 Sobic.003G155700 transcription initiation factor IID, 18kD subunit family protein, expressed K03127: transcription initiation factor TFIID subunit 13
19 Sobic.008G102466 - -
20 Sobic.002G069300 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic005G047700 Sobic005G047700 Sobic009G062701 Sobic009G062701 Sobic005G047700--Sobic009G062701 Sobic005G133750 Sobic005G133750 Sobic005G047700--Sobic005G133750 Sobic006G247200 Sobic006G247200 Sobic005G047700--Sobic006G247200 Sobic002G202050 Sobic002G202050 Sobic005G047700--Sobic002G202050 Sobic010G194801 Sobic010G194801 Sobic005G047700--Sobic010G194801 Sobic003G260050 Sobic003G260050 Sobic005G047700--Sobic003G260050 Sobic002G014100 Sobic002G014100 Sobic009G062701--Sobic002G014100 Sobic009G062701--Sobic005G133750 Sobic010G143666 Sobic010G143666 Sobic009G062701--Sobic010G143666 Sobic003G281000 Sobic003G281000 Sobic009G062701--Sobic003G281000 Sobic009G062701--Sobic006G247200 Sobic002G069300 Sobic002G069300 Sobic009G062701--Sobic002G069300 Sobic009G062701--Sobic002G202050 Sobic005G133750--Sobic002G202050 Sobic005G133750--Sobic006G247200 Sobic002G382200 Sobic002G382200 Sobic005G133750--Sobic002G382200 Sobic005G133750--Sobic002G014100 Sobic002G344800 Sobic002G344800 Sobic005G133750--Sobic002G344800 Sobic005G133750--Sobic010G143666 Sobic006G247200--Sobic002G202050 Sobic006G247200--Sobic002G344800 Sobic006G247200--Sobic010G143666 Sobic006G247200--Sobic002G014100 Sobic006G247200--Sobic002G382200 Sobic006G247200--Sobic005G133750 Sobic002G202050--Sobic002G202050 Sobic002G202050--Sobic006G247200 Sobic002G202050--Sobic002G344800 Sobic002G202050--Sobic002G014100 Sobic002G202050--Sobic010G143666 Sobic002G202050--Sobic002G382200 Sobic002G202050--Sobic005G133750 Sobic003G111700 Sobic003G111700 Sobic010G194801--Sobic003G111700 Sobic003G019500 Sobic003G019500 Sobic010G194801--Sobic003G019500 Sobic010G194801--Sobic003G260050 Sobic008G088812 Sobic008G088812 Sobic010G194801--Sobic008G088812 Sobic010G194801--Sobic002G202050 Sobic010G194801--Sobic006G247200 Sobic003G260050--Sobic003G111700 Sobic003G260050--Sobic010G194801 Sobic003G260050--Sobic002G202050 Sobic003G260050--Sobic006G247200 Sobic002G015950 Sobic002G015950 Sobic003G260050--Sobic002G015950 Sobic003G260050--Sobic003G281000
Octagon: transcription factors


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