Gene annotation
Transcriptome id Sobic.005G078600.1
Synonym
Functional annotation OsFBX411 - F-box domain containing protein, expressed
UniProt A0A1Z5RHH4
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF130
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G58930 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os11g09474.1 : OsFBX400 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G078600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G257650 - -
2 Sobic.010G203400 - -
3 Sobic.010G228800 receptor-like protein kinase precursor, putative, expressed -
4 Sobic.006G241500 - -
5 Sobic.003G327950 - -
6 Sobic.001G089850 - -
7 Sobic.004G224733 - -
8 Sobic.001G201933 - -
9 Sobic.010G226100 - -
10 Sobic.006G219400 - -
11 Sobic.002G088300 expressed protein -
12 Sobic.001G175200 expressed protein -
13 Sobic.009G109600 expressed protein -
14 Sobic.001G397550 - -
15 Sobic.007G028300 - -
16 Sobic.003G139600 expressed protein -
17 Sobic.006G061201 - -
18 Sobic.004G175800 chalcone synthase, putative, expressed -
19 Sobic.002G191900 OsFBX325 - F-box domain containing protein, expressed -
20 Sobic.004G282966 - -


Gene co-expression network
sample Sobic005G078600 Sobic005G078600 Sobic003G257650 Sobic003G257650 Sobic005G078600--Sobic003G257650 Sobic010G203400 Sobic010G203400 Sobic005G078600--Sobic010G203400 Sobic010G228800 Sobic010G228800 Sobic005G078600--Sobic010G228800 Sobic006G241500 Sobic006G241500 Sobic005G078600--Sobic006G241500 Sobic003G327950 Sobic003G327950 Sobic005G078600--Sobic003G327950 Sobic001G089850 Sobic001G089850 Sobic005G078600--Sobic001G089850 Sobic004G224733 Sobic004G224733 Sobic005G078600--Sobic004G224733 Sobic001G201933 Sobic001G201933 Sobic005G078600--Sobic001G201933 Sobic010G226100 Sobic010G226100 Sobic005G078600--Sobic010G226100 Sobic002G367000 Sobic002G367000 Sobic003G257650--Sobic002G367000 Sobic003G394150 Sobic003G394150 Sobic003G257650--Sobic003G394150 Sobic001G175200 Sobic001G175200 Sobic003G257650--Sobic001G175200 Sobic003G257650--Sobic010G226100 Sobic010G020000 Sobic010G020000 Sobic003G257650--Sobic010G020000 Sobic003G257650--Sobic005G078600 Sobic007G190600 Sobic007G190600 Sobic003G257650--Sobic007G190600 Sobic006G038050 Sobic006G038050 Sobic003G257650--Sobic006G038050 Sobic003G257650--Sobic006G241500 Sobic010G203400--Sobic003G327950 Sobic010G203400--Sobic005G078600 Sobic003G094900 Sobic003G094900 Sobic010G203400--Sobic003G094900 Sobic009G131032 Sobic009G131032 Sobic010G203400--Sobic009G131032 Sobic003G271100 Sobic003G271100 Sobic010G203400--Sobic003G271100 Sobic006G219400 Sobic006G219400 Sobic010G203400--Sobic006G219400 Sobic001G397550 Sobic001G397550 Sobic010G203400--Sobic001G397550 Sobic010G203400--Sobic004G224733 Sobic002G395400 Sobic002G395400 Sobic010G203400--Sobic002G395400 Sobic005G198150 Sobic005G198150 Sobic010G228800--Sobic005G198150 Sobic010G228800--Sobic001G175200 Sobic010G228800--Sobic006G241500 Sobic001G509901 Sobic001G509901 Sobic010G228800--Sobic001G509901 Sobic006G224600 Sobic006G224600 Sobic010G228800--Sobic006G224600 Sobic004G061100 Sobic004G061100 Sobic010G228800--Sobic004G061100 Sobic001G486400 Sobic001G486400 Sobic010G228800--Sobic001G486400 Sobic003G340200 Sobic003G340200 Sobic010G228800--Sobic003G340200 Sobic005G166200 Sobic005G166200 Sobic010G228800--Sobic005G166200 Sobic006G059150 Sobic006G059150 Sobic006G241500--Sobic006G059150 SobicK004201 SobicK004201 Sobic006G241500--SobicK004201 Sobic006G241500--Sobic010G228800 Sobic003G388201 Sobic003G388201 Sobic006G241500--Sobic003G388201 Sobic006G241500--Sobic010G226100 Sobic006G241500--Sobic007G190600 Sobic003G198850 Sobic003G198850 Sobic006G241500--Sobic003G198850 Sobic006G241500--Sobic003G257650 Sobic006G241500--Sobic002G367000 Sobic003G327950--Sobic001G397550 Sobic003G327950--Sobic004G224733 Sobic007G028300 Sobic007G028300 Sobic003G327950--Sobic007G028300 Sobic003G163000 Sobic003G163000 Sobic003G327950--Sobic003G163000 Sobic004G332200 Sobic004G332200 Sobic003G327950--Sobic004G332200 Sobic004G199100 Sobic004G199100 Sobic003G327950--Sobic004G199100 Sobic003G327950--Sobic010G203400 Sobic005G045250 Sobic005G045250 Sobic003G327950--Sobic005G045250 Sobic003G327950--Sobic006G219400 Sobic007G137201 Sobic007G137201 Sobic001G089850--Sobic007G137201 Sobic004G080901 Sobic004G080901 Sobic001G089850--Sobic004G080901 Sobic001G089850--Sobic010G226100 Sobic001G089850--Sobic005G078600 Sobic001G089850--Sobic003G257650 Sobic009G177100 Sobic009G177100 Sobic001G089850--Sobic009G177100 Sobic001G089850--Sobic001G486400 Sobic001G089850--Sobic005G198150 Sobic001G089850--Sobic010G228800 Sobic004G224733--Sobic001G397550 Sobic004G224733--Sobic004G332200 Sobic004G224733--Sobic003G327950 Sobic004G224733--Sobic006G219400 Sobic004G224733--Sobic007G028300 Sobic004G078200 Sobic004G078200 Sobic004G224733--Sobic004G078200 Sobic004G282966 Sobic004G282966 Sobic004G224733--Sobic004G282966 Sobic006G074600 Sobic006G074600 Sobic004G224733--Sobic006G074600 Sobic003G139600 Sobic003G139600 Sobic004G224733--Sobic003G139600 Sobic010G002301 Sobic010G002301 Sobic001G201933--Sobic010G002301 Sobic001G201933--Sobic003G139600 Sobic002G191900 Sobic002G191900 Sobic001G201933--Sobic002G191900 Sobic007G113566 Sobic007G113566 Sobic001G201933--Sobic007G113566 Sobic001G465600 Sobic001G465600 Sobic001G201933--Sobic001G465600 Sobic004G162100 Sobic004G162100 Sobic001G201933--Sobic004G162100 Sobic001G201933--Sobic004G078200 Sobic001G201933--Sobic006G219400 Sobic004G157050 Sobic004G157050 Sobic001G201933--Sobic004G157050 Sobic010G226100--Sobic003G257650 Sobic010G226100--Sobic006G241500 Sobic009G258000 Sobic009G258000 Sobic010G226100--Sobic009G258000 Sobic010G226100--Sobic003G198850 Sobic001G074900 Sobic001G074900 Sobic010G226100--Sobic001G074900 Sobic010G226100--Sobic001G089850 Sobic003G432400 Sobic003G432400 Sobic010G226100--Sobic003G432400 Sobic010G226100--Sobic002G367000 Sobic010G226100--Sobic004G282966
Octagon: transcription factors


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