Gene annotation
Transcriptome id Sobic.005G107200.1
Synonym
Functional annotation FEN1A - Putative flap endonuclease protein, expressed
UniProt A0A1B6PRJ5
Pfam PF00752
Panther DB PTHR11081 PTHR11081:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006281; DNA repair GO:0004518nuclease activity


Orthologs (automatic annotation)
TAIR AT5G26680 : 5\'-3\' exonuclease family protein
RAP-DB (Rice) LOC_Os05g46270.1 : FEN1A - Putative flap endonuclease protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK12287
Barley HORVU5Hr1G117650.9 , HORVU5Hr1G117650.8 , HORVU5Hr1G117650.1
Wheat TraesCS5D02G514000 , TraesCS4A02G359000 , TraesCS4A02G359000 , TraesCS5B02G513500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.K044420 - -
2 Sobic.009G220400 glyoxal oxidase-related, putative, expressed -
3 Sobic.005G071000 NBS-LRR disease resistance protein, putative, expressed -
4 Sobic.001G056000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.004G236901 - -
6 Sobic.010G123750 - -
7 Sobic.007G069900 expressed protein -
8 Sobic.005G186000 speckle-type POZ protein, putative, expressed K10523: speckle-type POZ protein
9 Sobic.001G258500 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.009G021050 - -
11 Sobic.007G139850 - -
12 Sobic.009G248700 C4-dicarboxylate transporter/malic acid transport protein, expressed -
13 Sobic.009G037400 cytokinin inducible protein, putative, expressed -
14 Sobic.008G031800 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.006G062466 - -
16 Sobic.007G084900 - -
17 Sobic.005G167600 resistance protein, putative, expressed -
18 Sobic.003G434500 expressed protein -
19 Sobic.001G273600 expressed protein -
20 Sobic.006G218950 - -


Gene co-expression network
sample Sobic005G107200 Sobic005G107200 SobicK044420 SobicK044420 Sobic005G107200--SobicK044420 Sobic009G220400 Sobic009G220400 Sobic005G107200--Sobic009G220400 Sobic005G071000 Sobic005G071000 Sobic005G107200--Sobic005G071000 Sobic001G056000 Sobic001G056000 Sobic005G107200--Sobic001G056000 Sobic004G236901 Sobic004G236901 Sobic005G107200--Sobic004G236901 Sobic010G123750 Sobic010G123750 Sobic005G107200--Sobic010G123750 Sobic007G069900 Sobic007G069900 Sobic005G107200--Sobic007G069900 Sobic005G186000 Sobic005G186000 Sobic005G107200--Sobic005G186000 Sobic001G258500 Sobic001G258500 Sobic005G107200--Sobic001G258500 SobicK044420--Sobic009G220400 SobicK044420--Sobic005G071000 SobicK044420--Sobic001G056000 SobicK044420--Sobic004G236901 SobicK044420--Sobic007G069900 SobicK044420--Sobic010G123750 Sobic009G021050 Sobic009G021050 SobicK044420--Sobic009G021050 Sobic007G139850 Sobic007G139850 SobicK044420--Sobic007G139850 SobicK044420--Sobic001G258500 Sobic009G220400--Sobic005G071000 Sobic009G220400--Sobic001G056000 Sobic009G220400--Sobic004G236901 Sobic009G220400--Sobic010G123750 Sobic009G220400--SobicK044420 Sobic009G220400--Sobic007G069900 Sobic009G220400--Sobic001G258500 Sobic008G031800 Sobic008G031800 Sobic009G220400--Sobic008G031800 Sobic007G084900 Sobic007G084900 Sobic009G220400--Sobic007G084900 Sobic005G071000--Sobic009G220400 Sobic005G071000--Sobic001G056000 Sobic005G071000--Sobic004G236901 Sobic005G071000--Sobic010G123750 Sobic005G071000--SobicK044420 Sobic005G071000--Sobic007G069900 Sobic005G071000--Sobic001G258500 Sobic003G384650 Sobic003G384650 Sobic005G071000--Sobic003G384650 Sobic005G071000--Sobic007G084900 Sobic001G056000--Sobic009G220400 Sobic001G056000--Sobic005G071000 Sobic001G056000--Sobic004G236901 Sobic001G056000--Sobic010G123750 Sobic001G056000--SobicK044420 Sobic001G056000--Sobic007G069900 Sobic001G056000--Sobic001G258500 Sobic001G056000--Sobic007G084900 Sobic001G056000--Sobic008G031800 Sobic004G236901--Sobic009G220400 Sobic004G236901--Sobic005G071000 Sobic004G236901--Sobic001G056000 Sobic004G236901--Sobic010G123750 Sobic004G236901--Sobic007G069900 Sobic004G236901--SobicK044420 Sobic001G018700 Sobic001G018700 Sobic004G236901--Sobic001G018700 Sobic010G123750--Sobic009G220400 Sobic010G123750--Sobic004G236901 Sobic010G123750--Sobic005G071000 Sobic010G123750--Sobic001G056000 Sobic010G123750--Sobic007G069900 Sobic004G075301 Sobic004G075301 Sobic010G123750--Sobic004G075301 Sobic003G242500 Sobic003G242500 Sobic010G123750--Sobic003G242500 Sobic010G123750--Sobic001G018700 Sobic007G069900--Sobic010G123750 Sobic007G069900--Sobic009G220400 Sobic007G069900--Sobic005G071000 Sobic007G069900--Sobic001G056000 Sobic007G069900--Sobic004G236901 Sobic007G069900--SobicK044420 Sobic001G507933 Sobic001G507933 Sobic007G069900--Sobic001G507933 Sobic008G177700 Sobic008G177700 Sobic007G069900--Sobic008G177700 Sobic007G069900--Sobic003G242500 Sobic005G186000--Sobic005G107200 Sobic005G186000--SobicK044420 Sobic005G186000--Sobic009G220400 Sobic005G186000--Sobic005G071000 Sobic005G186000--Sobic001G056000 Sobic005G186000--Sobic004G236901 Sobic005G186000--Sobic010G123750 Sobic005G186000--Sobic007G069900 Sobic005G186000--Sobic008G031800 Sobic006G062466 Sobic006G062466 Sobic001G258500--Sobic006G062466 Sobic001G258500--Sobic009G220400 Sobic001G258500--Sobic005G071000 Sobic001G258500--Sobic001G056000 Sobic001G258500--Sobic004G236901 Sobic001G258500--Sobic010G123750 Sobic001G258500--SobicK044420 Sobic009G024166 Sobic009G024166 Sobic001G258500--Sobic009G024166 Sobic006G257250 Sobic006G257250 Sobic001G258500--Sobic006G257250
Octagon: transcription factors


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