Gene annotation
Transcriptome id Sobic.005G164300.1
Synonym Sb05g022510, ATCHS, TT4, CHS
Functional annotation chalcone synthase, putative, expressed
UniProt -
Pfam PF00195
Panther DB PTHR11877 PTHR11877:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13930 : Chalcone and stilbene synthase family protein
RAP-DB (Rice) LOC_Os07g31770.1 : chalcone synthase, putative, expressed
MaizeGDB (Corn) Zm00025a024178 , Zm00025a033583 , Zm00025a024185
Brachypodium KQJ89844 , KQK13828
Barley HORVU5Hr1G093950.3 , HORVU2Hr1G005220.3 , HORVU2Hr1G005220.2 , HORVU2Hr1G005220.5 , HORVU2Hr1G005220.4 , HORVU7Hr1G020920.4 , HORVU7Hr1G020920.5 , HORVU7Hr1G020920.6 , HORVU7Hr1G020920.7 , HORVU7Hr1G020920.1 , HORVU7Hr1G020920.2 , HORVU7Hr1G020920.3 , HORVU4Hr1G003250.2 , HORVU4Hr1G003250.1 , HORVU7Hr1G024480.2 , HORVU7Hr1G024480.1 , HORVU7Hr1G009190.1 , HORVU6Hr1G003020.3 , HORVU6Hr1G003020.2 , HORVU6Hr1G003020.1 , HORVU6Hr1G074060.1 , HORVU6Hr1G074060.2 , HORVU5Hr1G093950.4 , HORVU5Hr1G093950.1 , HORVU5Hr1G093950.2 , HORVU2Hr1G116390.1 , HORVU2Hr1G116390.2 , HORVU2Hr1G116390.3 , HORVU2Hr1G116390.4
Wheat TraesCS2B02G048400 , TraesCS6A02G298400 , TraesCS6D02G278200 , TraesCS7D02G089300 , TraesCS2B02G558400 , TraesCS2B02G558400 , TraesCS4D02G351300 , TraesCS5B02G487700 , TraesCS2A02G025600 , TraesCS2A02G035300 , TraesCS4A02G437900 , TraesCS4B02G357100 , TraesCS6D02G018500 , TraesCS2D02G030600 , TraesCS5A02G526900 , TraesCS7A02G093900 , TraesCS1D02G359600 , TraesCS6B02G327900 , TraesCS6B02G022300 , TraesCS6A02G015500 , TraesCS6B02G022500 , TraesCS4A02G292500 , TraesCS6A02G015300 , TraesCS5B02G383300 , TraesCS2A02G527700 , TraesCS2B02G041300 , TraesCS2A02G527700 , TraesCS2D02G530600 , TraesCS5A02G379500 , TraesCS5A02G379400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G045500 carrier, putative, expressed -
2 Sobic.007G067300 Cupin domain containing protein, expressed -
3 Sobic.006G206900 60S ribosomal protein L7, putative, expressed -
4 Sobic.005G169000 3-ketoacyl-CoA synthase, putative, expressed -
5 Sobic.005G169100 cytochrome P450, putative, expressed -
6 Sobic.001G342700 protein phosphotase protein, putative, expressed -
7 Sobic.005G156600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed K08237: hydroquinone glucosyltransferase
8 Sobic.002G024650 - -
9 Sobic.007G015800 - -
10 Sobic.006G033260 - -
11 Sobic.001G121850 - -
12 Sobic.001G121850 - -
13 Sobic.001G121850 - -
14 Sobic.001G121850 - -
15 Sobic.001G121850 - -
16 Sobic.001G121850 - -
17 Sobic.001G121850 - -
18 Sobic.001G121850 - -
19 Sobic.010G102300 expressed protein -
20 Sobic.002G163100 expressed protein -


Gene co-expression network
sample Sobic005G164300 Sobic005G164300 Sobic005G045500 Sobic005G045500 Sobic005G164300--Sobic005G045500 Sobic007G067300 Sobic007G067300 Sobic005G164300--Sobic007G067300 Sobic006G206900 Sobic006G206900 Sobic005G164300--Sobic006G206900 Sobic005G169000 Sobic005G169000 Sobic005G164300--Sobic005G169000 Sobic005G169100 Sobic005G169100 Sobic005G164300--Sobic005G169100 Sobic001G342700 Sobic001G342700 Sobic005G164300--Sobic001G342700 Sobic005G156600 Sobic005G156600 Sobic005G164300--Sobic005G156600 Sobic002G024650 Sobic002G024650 Sobic005G164300--Sobic002G024650 Sobic007G015800 Sobic007G015800 Sobic005G164300--Sobic007G015800 Sobic001G121850 Sobic001G121850 Sobic005G045500--Sobic001G121850 Sobic005G045500--Sobic002G024650 Sobic007G067300--Sobic001G342700 Sobic007G067300--Sobic005G169100 Sobic007G067300--Sobic006G206900 Sobic008G068166 Sobic008G068166 Sobic007G067300--Sobic008G068166 Sobic007G067300--Sobic005G045500 Sobic010G102300 Sobic010G102300 Sobic007G067300--Sobic010G102300 Sobic007G067300--Sobic007G015800 Sobic007G066908 Sobic007G066908 Sobic007G067300--Sobic007G066908 Sobic009G009400 Sobic009G009400 Sobic007G067300--Sobic009G009400 Sobic006G206900--Sobic005G045500 Sobic006G206900--Sobic002G024650 Sobic006G206900--Sobic001G121850 Sobic003G426100 Sobic003G426100 Sobic005G169000--Sobic003G426100 Sobic005G169000--Sobic005G164300 Sobic005G169000--Sobic005G045500 Sobic005G169000--Sobic006G206900 Sobic005G169000--Sobic010G102300 Sobic004G180301 Sobic004G180301 Sobic005G169000--Sobic004G180301 Sobic010G035700 Sobic010G035700 Sobic005G169000--Sobic010G035700 Sobic005G169000--Sobic007G067300 Sobic007G066932 Sobic007G066932 Sobic005G169000--Sobic007G066932 Sobic005G169100--Sobic007G067300 Sobic005G169100--Sobic001G342700 Sobic005G169100--Sobic007G015800 Sobic005G169100--Sobic007G066908 Sobic005G169100--Sobic006G206900 Sobic005G169100--Sobic010G102300 Sobic002G182500 Sobic002G182500 Sobic005G169100--Sobic002G182500 Sobic005G169100--Sobic010G035700 Sobic001G319700 Sobic001G319700 Sobic005G169100--Sobic001G319700 Sobic001G342700--Sobic007G067300 Sobic001G343601 Sobic001G343601 Sobic001G342700--Sobic001G343601 Sobic001G342700--Sobic009G009400 Sobic001G342700--Sobic005G169100 Sobic002G146100 Sobic002G146100 Sobic001G342700--Sobic002G146100 Sobic006G033260 Sobic006G033260 Sobic001G342700--Sobic006G033260 Sobic001G342700--Sobic002G182500 Sobic001G342700--Sobic008G068166 Sobic008G054150 Sobic008G054150 Sobic001G342700--Sobic008G054150 Sobic002G182400 Sobic002G182400 Sobic005G156600--Sobic002G182400 Sobic005G156600--Sobic010G035700 Sobic002G163100 Sobic002G163100 Sobic005G156600--Sobic002G163100 Sobic005G156600--Sobic005G169100 Sobic002G018500 Sobic002G018500 Sobic005G156600--Sobic002G018500 Sobic001G335600 Sobic001G335600 Sobic005G156600--Sobic001G335600 Sobic005G156600--Sobic010G102300 Sobic005G156600--Sobic004G180301 Sobic004G128400 Sobic004G128400 Sobic005G156600--Sobic004G128400 Sobic002G024650--Sobic001G121850 Sobic002G024650--Sobic005G045500 Sobic007G015800--Sobic002G024650 Sobic007G015800--Sobic001G121850
Octagon: transcription factors


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