Gene annotation
Transcriptome id Sobic.002G163100.1
Synonym RTFL17, DVL4
Functional annotation expressed protein
UniProt C5X908
Pfam PF08137
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13245 : ROTUNDIFOLIA like 17
RAP-DB (Rice) LOC_Os01g62605.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G054600.1 , HORVU5Hr1G054600.2 , HORVU5Hr1G054600.4 , HORVU5Hr1G054600.5 , HORVU5Hr1G054600.6 , HORVU1Hr1G082610.1 , HORVU1Hr1G082610.2 , HORVU1Hr1G082370.3 , HORVU1Hr1G082370.2 , HORVU1Hr1G082370.1 , HORVU1Hr1G082460.3 , HORVU1Hr1G082460.2 , HORVU1Hr1G082460.1 , HORVU1Hr1G082420.2 , HORVU1Hr1G082420.1 , HORVU7Hr1G110580.1 , HORVU7Hr1G046310.1 , HORVU1Hr1G082410.1
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G072100 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
2 Sobic.003G437100 sulfotransferase domain containing protein, expressed -
3 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.005G156600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed K08237: hydroquinone glucosyltransferase
5 Sobic.010G102200 expressed protein -
6 Sobic.003G426300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.004G304300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
8 Sobic.003G430600 OsCML19 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
9 Sobic.002G310600 chalcone synthase, putative, expressed K17212: bisdemethoxycurcumin synthase
10 Sobic.002G018500 - -
11 Sobic.009G072900 calmodulin-binding protein, putative, expressed -
12 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
13 Sobic.009G128700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
14 Sobic.010G102300 expressed protein -
15 Sobic.001G335600 RNA-binding protein-like, putative, expressed -
16 Sobic.005G045600 O-methyltransferase, putative, expressed -
17 Sobic.001G495164 - -
18 Sobic.005G101700 dirigent, putative, expressed -
19 Sobic.003G280100 expressed protein -
20 Sobic.004G180301 - -


Gene co-expression network
sample Sobic002G163100 Sobic002G163100 Sobic010G072100 Sobic010G072100 Sobic002G163100--Sobic010G072100 Sobic003G437100 Sobic003G437100 Sobic002G163100--Sobic003G437100 Sobic003G426000 Sobic003G426000 Sobic002G163100--Sobic003G426000 Sobic005G156600 Sobic005G156600 Sobic002G163100--Sobic005G156600 Sobic010G102200 Sobic010G102200 Sobic002G163100--Sobic010G102200 Sobic003G426300 Sobic003G426300 Sobic002G163100--Sobic003G426300 Sobic004G304300 Sobic004G304300 Sobic002G163100--Sobic004G304300 Sobic003G430600 Sobic003G430600 Sobic002G163100--Sobic003G430600 Sobic002G310600 Sobic002G310600 Sobic002G163100--Sobic002G310600 Sobic003G280100 Sobic003G280100 Sobic010G072100--Sobic003G280100 Sobic010G072100--Sobic003G426000 Sobic010G072100--Sobic003G437100 Sobic010G072100--Sobic010G102200 Sobic009G128700 Sobic009G128700 Sobic010G072100--Sobic009G128700 Sobic010G072100--Sobic003G426300 Sobic005G101800 Sobic005G101800 Sobic010G072100--Sobic005G101800 Sobic007G067600 Sobic007G067600 Sobic010G072100--Sobic007G067600 Sobic004G148200 Sobic004G148200 Sobic010G072100--Sobic004G148200 Sobic003G437100--Sobic003G280100 Sobic005G206601 Sobic005G206601 Sobic003G437100--Sobic005G206601 Sobic007G227300 Sobic007G227300 Sobic003G437100--Sobic007G227300 Sobic003G437100--Sobic005G101800 Sobic003G437100--Sobic003G426300 Sobic003G437100--Sobic007G067600 Sobic005G101700 Sobic005G101700 Sobic003G437100--Sobic005G101700 Sobic010G084400 Sobic010G084400 Sobic003G437100--Sobic010G084400 Sobic002G247600 Sobic002G247600 Sobic003G437100--Sobic002G247600 Sobic002G195400 Sobic002G195400 Sobic003G426000--Sobic002G195400 Sobic003G426000--Sobic009G128700 Sobic003G426000--Sobic007G067600 Sobic003G426000--Sobic004G304300 Sobic003G426000--Sobic003G430600 Sobic003G426000--Sobic003G426300 Sobic003G426000--Sobic005G101800 Sobic001G319700 Sobic001G319700 Sobic003G426000--Sobic001G319700 Sobic003G200700 Sobic003G200700 Sobic003G426000--Sobic003G200700 Sobic002G182400 Sobic002G182400 Sobic005G156600--Sobic002G182400 Sobic010G035700 Sobic010G035700 Sobic005G156600--Sobic010G035700 Sobic005G156600--Sobic002G163100 Sobic005G169100 Sobic005G169100 Sobic005G156600--Sobic005G169100 Sobic002G018500 Sobic002G018500 Sobic005G156600--Sobic002G018500 Sobic001G335600 Sobic001G335600 Sobic005G156600--Sobic001G335600 Sobic010G102300 Sobic010G102300 Sobic005G156600--Sobic010G102300 Sobic004G180301 Sobic004G180301 Sobic005G156600--Sobic004G180301 Sobic004G128400 Sobic004G128400 Sobic005G156600--Sobic004G128400 Sobic010G102200--Sobic001G319700 Sobic007G015800 Sobic007G015800 Sobic010G102200--Sobic007G015800 Sobic010G102200--Sobic003G426000 Sobic010G102200--Sobic010G102300 Sobic010G102200--Sobic010G072100 Sobic008G164201 Sobic008G164201 Sobic010G102200--Sobic008G164201 Sobic010G102200--Sobic002G195400 Sobic010G102200--Sobic004G304300 Sobic010G102200--Sobic004G180301 Sobic003G426300--Sobic005G101800 Sobic003G426300--Sobic009G128700 Sobic003G426300--Sobic010G084400 Sobic003G426300--Sobic003G426000 Sobic003G252800 Sobic003G252800 Sobic003G426300--Sobic003G252800 Sobic001G063000 Sobic001G063000 Sobic003G426300--Sobic001G063000 Sobic010G117900 Sobic010G117900 Sobic003G426300--Sobic010G117900 Sobic003G426300--Sobic007G227300 Sobic001G400800 Sobic001G400800 Sobic003G426300--Sobic001G400800 Sobic007G066932 Sobic007G066932 Sobic004G304300--Sobic007G066932 Sobic003G426100 Sobic003G426100 Sobic004G304300--Sobic003G426100 Sobic004G304300--Sobic002G195400 Sobic004G304300--Sobic003G426000 Sobic004G304300--Sobic010G102300 Sobic007G067350 Sobic007G067350 Sobic004G304300--Sobic007G067350 Sobic004G304300--Sobic001G319700 Sobic004G304300--Sobic005G101800 Sobic004G304300--Sobic009G128700 Sobic003G430600--Sobic007G067600 Sobic003G430600--Sobic007G227300 Sobic003G430600--Sobic003G426000 Sobic010G084300 Sobic010G084300 Sobic003G430600--Sobic010G084300 Sobic003G430600--Sobic007G066932 Sobic003G430600--Sobic002G195400 Sobic003G430600--Sobic005G101800 Sobic003G430600--Sobic009G128700 Sobic006G099900 Sobic006G099900 Sobic003G430600--Sobic006G099900 Sobic004G176600 Sobic004G176600 Sobic002G310600--Sobic004G176600 Sobic002G310600--Sobic002G247600 Sobic005G084600 Sobic005G084600 Sobic002G310600--Sobic005G084600 Sobic009G072900 Sobic009G072900 Sobic002G310600--Sobic009G072900 Sobic002G310600--Sobic005G206601 Sobic001G403000 Sobic001G403000 Sobic002G310600--Sobic001G403000 Sobic006G044100 Sobic006G044100 Sobic002G310600--Sobic006G044100 Sobic003G366600 Sobic003G366600 Sobic002G310600--Sobic003G366600 Sobic010G185000 Sobic010G185000 Sobic002G310600--Sobic010G185000
Octagon: transcription factors


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