Gene annotation
Transcriptome id Sobic.005G183700.1
Synonym HCT, Sb05g024230
Functional annotation transferase family protein, putative, expressed
UniProt A0A1Z5RK43
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G48930 : hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
RAP-DB (Rice) LOC_Os04g56910.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G124070.1
Wheat TraesCS2B02G604100 , TraesCS2B02G604000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G056300 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@reticuline oxidase-like protein precursor, putative, expressed -
2 Sobic.003G245000 expressed protein -
3 Sobic.006G141200 - -
4 Sobic.001G421450 - -
5 Sobic.002G132201 - -
6 Sobic.007G007100 expressed protein -
7 Sobic.001G273950 - -
8 Sobic.003G253650 - -
9 Sobic.003G149700 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
10 Sobic.002G054800 "O2(Ortholog in maize:Hartings et al., 1989)"(PubMedID : 31659852)@bZIP transcription factor domain containing protein, expressed -
11 Sobic.010G215201 - -
12 Sobic.001G071500 - -
13 Sobic.002G240200 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
14 Sobic.005G073300 limonoid UDP-glucosyltransferase, putative, expressed -
15 Sobic.008G030801 - -
16 Sobic.001G242400 - -
17 Sobic.003G229900 - -
18 Sobic.002G172300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.006G161200 cysteine-rich repeat secretory protein precursor, putative, expressed -
20 Sobic.003G089500 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1


Gene co-expression network
sample Sobic005G183700 Sobic005G183700 Sobic006G056300 Sobic006G056300 Sobic005G183700--Sobic006G056300 Sobic003G245000 Sobic003G245000 Sobic005G183700--Sobic003G245000 Sobic006G141200 Sobic006G141200 Sobic005G183700--Sobic006G141200 Sobic001G421450 Sobic001G421450 Sobic005G183700--Sobic001G421450 Sobic002G132201 Sobic002G132201 Sobic005G183700--Sobic002G132201 Sobic007G007100 Sobic007G007100 Sobic005G183700--Sobic007G007100 Sobic001G273950 Sobic001G273950 Sobic005G183700--Sobic001G273950 Sobic003G253650 Sobic003G253650 Sobic005G183700--Sobic003G253650 Sobic003G149700 Sobic003G149700 Sobic005G183700--Sobic003G149700 Sobic006G056300--Sobic005G183700 Sobic006G056300--Sobic001G421450 Sobic002G172300 Sobic002G172300 Sobic006G056300--Sobic002G172300 Sobic001G371650 Sobic001G371650 Sobic006G056300--Sobic001G371650 Sobic004G264800 Sobic004G264800 Sobic006G056300--Sobic004G264800 Sobic006G056300--Sobic002G132201 Sobic006G056300--Sobic003G253650 Sobic007G077600 Sobic007G077600 Sobic006G056300--Sobic007G077600 Sobic007G032200 Sobic007G032200 Sobic006G056300--Sobic007G032200 Sobic003G245000--Sobic001G421450 Sobic003G245000--Sobic006G141200 Sobic003G245000--Sobic003G149700 Sobic005G150250 Sobic005G150250 Sobic003G245000--Sobic005G150250 Sobic002G321000 Sobic002G321000 Sobic003G245000--Sobic002G321000 Sobic006G222200 Sobic006G222200 Sobic003G245000--Sobic006G222200 Sobic008G109650 Sobic008G109650 Sobic003G245000--Sobic008G109650 Sobic003G245000--Sobic002G132201 Sobic001G084133 Sobic001G084133 Sobic003G245000--Sobic001G084133 Sobic006G141200--Sobic003G149700 Sobic006G141200--Sobic002G132201 Sobic002G054800 Sobic002G054800 Sobic006G141200--Sobic002G054800 Sobic001G071500 Sobic001G071500 Sobic006G141200--Sobic001G071500 Sobic006G141200--Sobic001G273950 Sobic006G141200--Sobic003G245000 Sobic005G073300 Sobic005G073300 Sobic006G141200--Sobic005G073300 Sobic010G215201 Sobic010G215201 Sobic006G141200--Sobic010G215201 Sobic006G141200--Sobic003G253650 Sobic001G421450--Sobic003G245000 Sobic001G421450--Sobic003G149700 Sobic001G421450--Sobic001G084133 Sobic001G421450--Sobic005G150250 Sobic003G193900 Sobic003G193900 Sobic001G421450--Sobic003G193900 Sobic001G421450--Sobic002G132201 Sobic003G356500 Sobic003G356500 Sobic001G421450--Sobic003G356500 Sobic001G421450--Sobic006G222200 Sobic006G155400 Sobic006G155400 Sobic001G421450--Sobic006G155400 Sobic002G132201--Sobic002G054800 Sobic002G132201--Sobic005G073300 Sobic002G132201--Sobic003G149700 Sobic002G132201--Sobic001G071500 Sobic002G240200 Sobic002G240200 Sobic002G132201--Sobic002G240200 Sobic009G022600 Sobic009G022600 Sobic002G132201--Sobic009G022600 Sobic002G132201--Sobic010G215201 Sobic002G132201--Sobic001G371650 Sobic002G132201--Sobic006G155400 Sobic006G049633 Sobic006G049633 Sobic007G007100--Sobic006G049633 Sobic003G229900 Sobic003G229900 Sobic007G007100--Sobic003G229900 Sobic002G266700 Sobic002G266700 Sobic007G007100--Sobic002G266700 Sobic002G055000 Sobic002G055000 Sobic007G007100--Sobic002G055000 Sobic004G296750 Sobic004G296750 Sobic007G007100--Sobic004G296750 Sobic008G061900 Sobic008G061900 Sobic007G007100--Sobic008G061900 Sobic001G480900 Sobic001G480900 Sobic007G007100--Sobic001G480900 Sobic010G011500 Sobic010G011500 Sobic007G007100--Sobic010G011500 Sobic001G297900 Sobic001G297900 Sobic007G007100--Sobic001G297900 Sobic006G161200 Sobic006G161200 Sobic001G273950--Sobic006G161200 Sobic008G030801 Sobic008G030801 Sobic001G273950--Sobic008G030801 Sobic001G273950--Sobic006G141200 Sobic001G273950--Sobic001G071500 Sobic006G049000 Sobic006G049000 Sobic001G273950--Sobic006G049000 Sobic001G273950--Sobic003G229900 Sobic001G273950--Sobic006G049633 Sobic001G273950--Sobic010G215201 Sobic001G273950--Sobic002G054800 Sobic003G253650--Sobic002G054800 Sobic001G421100 Sobic001G421100 Sobic003G253650--Sobic001G421100 Sobic003G253650--Sobic002G132201 Sobic003G253650--Sobic008G030801 Sobic003G253650--Sobic001G071500 Sobic003G253650--Sobic006G141200 Sobic007G072700 Sobic007G072700 Sobic003G253650--Sobic007G072700 Sobic003G253650--Sobic002G172300 Sobic003G253650--Sobic005G073300 Sobic003G149700--Sobic002G132201 Sobic003G149700--Sobic005G150250 Sobic003G149700--Sobic005G073300 Sobic003G149700--Sobic009G022600 Sobic003G149700--Sobic006G155400 Sobic003G149700--Sobic002G054800 Sobic003G149700--Sobic001G071500 Sobic003G149700--Sobic003G356500 Sobic003G149700--Sobic003G193900
Octagon: transcription factors


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