Gene annotation
Transcriptome id Sobic.005G209600.2,Sobic.005G209600.1
Synonym
Functional annotation kinesin-4, putative, expressed
UniProt A0A1B6PTU7 , A0A1Z5RJN9
Pfam PF00307 PF00225
Panther DB PTHR24115 PTHR24115:SF438
NCBI CDD KOG0239; Kinesin (KAR3 subfamily)
KEGG Orthology K10406; kinesin family member C2/C3
Gene Ontology GO:0005515; protein binding GO:0008017microtubule binding GO:0007018microtubule-based movement GO:0005524ATP binding GO:0003777microtubule motor activity GO:0005871kinesin complex


Orthologs (automatic annotation)
TAIR AT2G47500 : P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
RAP-DB (Rice) LOC_Os11g44880.1 : kinesin-4, putative, expressed
MaizeGDB (Corn) Zm00025a029162 , Zm00025a015949
Brachypodium KQJ86418 , PNT62986
Barley HORVU5Hr1G024390.28 , HORVU5Hr1G024390.29 , HORVU5Hr1G024390.20 , HORVU5Hr1G024390.21 , HORVU5Hr1G024390.22 , HORVU5Hr1G024390.23 , HORVU5Hr1G024390.25 , HORVU5Hr1G024390.26 , HORVU5Hr1G024390.27 , HORVU5Hr1G024390.19 , HORVU5Hr1G024390.15 , HORVU5Hr1G024390.17 , HORVU5Hr1G024390.11 , HORVU5Hr1G024390.10 , HORVU5Hr1G024390.13 , HORVU5Hr1G024390.12 , HORVU5Hr1G024390.9 , HORVU5Hr1G024390.8 , HORVU5Hr1G024390.1 , HORVU5Hr1G024390.3 , HORVU5Hr1G024390.2 , HORVU5Hr1G024390.5 , HORVU5Hr1G024390.4 , HORVU5Hr1G024390.7
Wheat TraesCS5A02G092900 , TraesCS5A02G092900 , TraesCS5D02G105200 , TraesCS5B02G099000 , TraesCS5B02G099000 , TraesCS4D02G144800 , TraesCS4D02G144800 , TraesCS4B02G126400 , TraesCS4B02G126400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G234701 - -
2 Sobic.001G444900 STRUBBELIG-RECEPTOR FAMILY 7("PubMedID : 26759170,PubMedID : 24597475")@STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
3 Sobic.003G236000 CGMC_MAPKCMGC_2.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
4 Sobic.010G191900 two-component response regulator, putative, expressed -
5 Sobic.003G286000 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.001G121800 - -
7 Sobic.010G006800 auxin-induced protein 5NG4, putative, expressed -
8 Sobic.001G220500 CK1_CaseinKinase_1.9 - CK1 includes the casein kinase 1 kinases, expressed -
9 Sobic.008G172000 expressed protein -
10 Sobic.008G181900 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
11 Sobic.002G102300 - -
12 Sobic.009G096433 - -
13 Sobic.004G355750 - -
14 Sobic.010G276200 MLO domain containing protein, putative, expressed K08472: mlo protein
15 Sobic.010G246132 - -
16 Sobic.001G408001 - -
17 Sobic.002G273200 kinesin motor domain containing protein, expressed K11498: centromeric protein E
18 Sobic.002G061300 OsFBX239 - F-box domain containing protein, expressed -
19 Sobic.009G002100 expressed protein -
20 Sobic.004G336800 chloroplast unusual positioning protein, putative, expressed -


Gene co-expression network
sample Sobic005G209600 Sobic005G209600 Sobic003G234701 Sobic003G234701 Sobic005G209600--Sobic003G234701 Sobic001G444900 Sobic001G444900 Sobic005G209600--Sobic001G444900 Sobic003G236000 Sobic003G236000 Sobic005G209600--Sobic003G236000 Sobic010G191900 Sobic010G191900 Sobic005G209600--Sobic010G191900 Sobic003G286000 Sobic003G286000 Sobic005G209600--Sobic003G286000 Sobic001G121800 Sobic001G121800 Sobic005G209600--Sobic001G121800 Sobic010G006800 Sobic010G006800 Sobic005G209600--Sobic010G006800 Sobic001G220500 Sobic001G220500 Sobic005G209600--Sobic001G220500 Sobic008G172000 Sobic008G172000 Sobic005G209600--Sobic008G172000 Sobic010G061600 Sobic010G061600 Sobic003G234701--Sobic010G061600 Sobic006G162500 Sobic006G162500 Sobic003G234701--Sobic006G162500 Sobic002G418300 Sobic002G418300 Sobic003G234701--Sobic002G418300 Sobic004G190400 Sobic004G190400 Sobic003G234701--Sobic004G190400 Sobic004G080800 Sobic004G080800 Sobic003G234701--Sobic004G080800 Sobic002G189500 Sobic002G189500 Sobic003G234701--Sobic002G189500 Sobic007G148600 Sobic007G148600 Sobic003G234701--Sobic007G148600 Sobic009G145000 Sobic009G145000 Sobic003G234701--Sobic009G145000 Sobic002G243400 Sobic002G243400 Sobic003G234701--Sobic002G243400 Sobic001G444900--Sobic001G121800 Sobic001G405100 Sobic001G405100 Sobic001G444900--Sobic001G405100 Sobic001G444900--Sobic005G209600 Sobic001G444900--Sobic003G236000 Sobic004G336800 Sobic004G336800 Sobic001G444900--Sobic004G336800 Sobic001G024250 Sobic001G024250 Sobic001G444900--Sobic001G024250 Sobic009G096433 Sobic009G096433 Sobic001G444900--Sobic009G096433 Sobic003G356800 Sobic003G356800 Sobic001G444900--Sobic003G356800 Sobic007G146300 Sobic007G146300 Sobic001G444900--Sobic007G146300 Sobic006G001100 Sobic006G001100 Sobic003G236000--Sobic006G001100 Sobic007G226700 Sobic007G226700 Sobic003G236000--Sobic007G226700 Sobic005G225500 Sobic005G225500 Sobic003G236000--Sobic005G225500 Sobic008G159701 Sobic008G159701 Sobic003G236000--Sobic008G159701 Sobic003G236000--Sobic001G220500 Sobic006G027601 Sobic006G027601 Sobic003G236000--Sobic006G027601 Sobic010G202200 Sobic010G202200 Sobic003G236000--Sobic010G202200 Sobic005G148950 Sobic005G148950 Sobic003G236000--Sobic005G148950 Sobic006G032000 Sobic006G032000 Sobic003G236000--Sobic006G032000 Sobic003G191400 Sobic003G191400 Sobic010G191900--Sobic003G191400 Sobic008G181900 Sobic008G181900 Sobic010G191900--Sobic008G181900 Sobic001G539600 Sobic001G539600 Sobic010G191900--Sobic001G539600 Sobic004G222400 Sobic004G222400 Sobic010G191900--Sobic004G222400 Sobic010G141001 Sobic010G141001 Sobic010G191900--Sobic010G141001 Sobic003G255400 Sobic003G255400 Sobic010G191900--Sobic003G255400 Sobic010G276200 Sobic010G276200 Sobic010G191900--Sobic010G276200 Sobic003G329600 Sobic003G329600 Sobic010G191900--Sobic003G329600 Sobic010G176400 Sobic010G176400 Sobic010G191900--Sobic010G176400 Sobic004G024800 Sobic004G024800 Sobic003G286000--Sobic004G024800 Sobic001G539880 Sobic001G539880 Sobic003G286000--Sobic001G539880 Sobic007G148233 Sobic007G148233 Sobic003G286000--Sobic007G148233 Sobic003G195400 Sobic003G195400 Sobic003G286000--Sobic003G195400 Sobic004G158100 Sobic004G158100 Sobic003G286000--Sobic004G158100 Sobic002G225800 Sobic002G225800 Sobic003G286000--Sobic002G225800 Sobic005G035250 Sobic005G035250 Sobic003G286000--Sobic005G035250 Sobic008G011901 Sobic008G011901 Sobic003G286000--Sobic008G011901 Sobic001G364700 Sobic001G364700 Sobic003G286000--Sobic001G364700 Sobic005G023600 Sobic005G023600 Sobic001G121800--Sobic005G023600 Sobic001G121800--Sobic007G146300 Sobic004G080000 Sobic004G080000 Sobic001G121800--Sobic004G080000 Sobic001G445400 Sobic001G445400 Sobic001G121800--Sobic001G445400 Sobic001G121800--Sobic010G276200 Sobic001G121800--Sobic001G024250 Sobic006G193700 Sobic006G193700 Sobic001G121800--Sobic006G193700 Sobic004G041800 Sobic004G041800 Sobic001G121800--Sobic004G041800 Sobic002G029000 Sobic002G029000 Sobic001G121800--Sobic002G029000 Sobic003G238250 Sobic003G238250 Sobic010G006800--Sobic003G238250 Sobic007G101600 Sobic007G101600 Sobic010G006800--Sobic007G101600 Sobic002G102300 Sobic002G102300 Sobic010G006800--Sobic002G102300 Sobic001G490950 Sobic001G490950 Sobic010G006800--Sobic001G490950 Sobic004G074900 Sobic004G074900 Sobic010G006800--Sobic004G074900 Sobic007G138000 Sobic007G138000 Sobic010G006800--Sobic007G138000 Sobic001G286900 Sobic001G286900 Sobic010G006800--Sobic001G286900 Sobic008G057600 Sobic008G057600 Sobic010G006800--Sobic008G057600 Sobic003G392275 Sobic003G392275 Sobic010G006800--Sobic003G392275 Sobic001G220500--Sobic007G226700 Sobic001G220500--Sobic004G080800 Sobic001G240600 Sobic001G240600 Sobic001G220500--Sobic001G240600 Sobic003G024100 Sobic003G024100 Sobic001G220500--Sobic003G024100 Sobic001G142501 Sobic001G142501 Sobic001G220500--Sobic001G142501 Sobic005G172000 Sobic005G172000 Sobic001G220500--Sobic005G172000 Sobic010G242600 Sobic010G242600 Sobic001G220500--Sobic010G242600 Sobic001G220500--Sobic003G191400 Sobic001G220500--Sobic006G001100 Sobic008G172000--Sobic004G222400 Sobic008G172000--Sobic010G141001 Sobic008G099000 Sobic008G099000 Sobic008G172000--Sobic008G099000 Sobic008G172000--Sobic001G539600 Sobic008G172000--Sobic003G255400 Sobic008G172000--Sobic010G176400 Sobic008G172000--Sobic003G329600 Sobic007G221932 Sobic007G221932 Sobic008G172000--Sobic007G221932 Sobic009G091000 Sobic009G091000 Sobic008G172000--Sobic009G091000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.