Gene annotation
Transcriptome id Sobic.010G191900.2,Sobic.010G191900.1
Synonym ARR12, RR12
Functional annotation two-component response regulator, putative, expressed
UniProt A0A194YL88 , A0A1W0VTT4
Pfam PF00249 PF00072
Panther DB PTHR26402 PTHR26402:SF529
NCBI CDD KOG1601; GATA-4/5/6 transcription factors
KEGG Orthology -
Gene Ontology GO:0000160; phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT4G16110 : response regulator 12,response regulator 2
RAP-DB (Rice) LOC_Os02g08500.1 : two-component response regulator, putative, expressed
MaizeGDB (Corn) Zm00025a042121 , Zm00025a019247 , Zm00025a051552
Brachypodium -
Barley HORVU7Hr1G112830.1 , HORVU7Hr1G112830.2 , HORVU7Hr1G114450.1 , HORVU7Hr1G114450.2 , HORVU7Hr1G112950.5 , HORVU7Hr1G112950.4 , HORVU7Hr1G112950.3 , HORVU7Hr1G030050.4 , HORVU7Hr1G030050.6 , HORVU7Hr1G030050.1 , HORVU7Hr1G030050.3 , HORVU7Hr1G030050.2 , HORVU7Hr1G030000.2 , HORVU7Hr1G030000.3 , HORVU7Hr1G030000.1 , HORVU7Hr1G030000.6 , HORVU7Hr1G030000.7 , HORVU7Hr1G030000.4 , HORVU7Hr1G030000.5 , HORVU7Hr1G030000.8 , HORVU7Hr1G030000.9 , HORVU7Hr1G030000.12 , HORVU7Hr1G030000.13 , HORVU7Hr1G030000.15
Wheat TraesCS3A02G473800 , TraesCS7B02G422100 , TraesCS7B02G421000 , TraesCS7A02G511300 , TraesCS7B02G408600 , TraesCS7D02G489600 , TraesCS7B02G049200 , TraesCS3B02G517000 , TraesCS7B02G422000 , TraesCS7D02G148000 , TraesCS7A02G511100 , TraesCS7A02G146400 , TraesCS7A02G502300 , TraesCS7D02G500600 , TraesCS7A02G146500 , TraesCS7D02G499700 , TraesCSU02G040900 , TraesCS3A02G473600 , TraesCS7B02G049000 , TraesCS7A02G146700 , TraesCS7B02G408700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G191400 DUF538 domain containing protein, putative, expressed -
2 Sobic.008G181900 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
3 Sobic.001G539600 expansin precursor, putative, expressed -
4 Sobic.004G222400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
5 Sobic.010G141001 - -
6 Sobic.003G255400 glyoxal oxidase-related, putative, expressed -
7 Sobic.010G276200 MLO domain containing protein, putative, expressed K08472: mlo protein
8 Sobic.003G329600 CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
9 Sobic.010G176400 pectate lyase precursor, putative, expressed K01728: pectate lyase
10 Sobic.008G099000 protein of unknown function domain containing protein, expressed -
11 Sobic.002G273200 kinesin motor domain containing protein, expressed K11498: centromeric protein E
12 Sobic.010G089900 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
13 Sobic.008G172000 expressed protein -
14 Sobic.009G091000 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
15 Sobic.001G539940 - -
16 Sobic.001G036200 - -
17 Sobic.007G221932 - -
18 Sobic.009G252000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
19 Sobic.001G466100 glycosyl hydrolase family 10 protein, putative, expressed -
20 Sobic.001G351600 hydrolase protein, putative, expressed -


Gene co-expression network
sample Sobic010G191900 Sobic010G191900 Sobic003G191400 Sobic003G191400 Sobic010G191900--Sobic003G191400 Sobic008G181900 Sobic008G181900 Sobic010G191900--Sobic008G181900 Sobic001G539600 Sobic001G539600 Sobic010G191900--Sobic001G539600 Sobic004G222400 Sobic004G222400 Sobic010G191900--Sobic004G222400 Sobic010G141001 Sobic010G141001 Sobic010G191900--Sobic010G141001 Sobic003G255400 Sobic003G255400 Sobic010G191900--Sobic003G255400 Sobic010G276200 Sobic010G276200 Sobic010G191900--Sobic010G276200 Sobic003G329600 Sobic003G329600 Sobic010G191900--Sobic003G329600 Sobic010G176400 Sobic010G176400 Sobic010G191900--Sobic010G176400 Sobic005G172000 Sobic005G172000 Sobic003G191400--Sobic005G172000 Sobic003G191400--Sobic010G191900 Sobic008G168932 Sobic008G168932 Sobic003G191400--Sobic008G168932 Sobic004G289900 Sobic004G289900 Sobic003G191400--Sobic004G289900 Sobic004G024800 Sobic004G024800 Sobic003G191400--Sobic004G024800 Sobic001G539880 Sobic001G539880 Sobic003G191400--Sobic001G539880 Sobic005G185750 Sobic005G185750 Sobic003G191400--Sobic005G185750 Sobic010G257800 Sobic010G257800 Sobic003G191400--Sobic010G257800 Sobic008G097800 Sobic008G097800 Sobic003G191400--Sobic008G097800 Sobic008G181900--Sobic008G168932 Sobic005G068500 Sobic005G068500 Sobic008G181900--Sobic005G068500 Sobic008G099000 Sobic008G099000 Sobic008G181900--Sobic008G099000 Sobic008G181900--Sobic004G289900 Sobic008G181900--Sobic010G141001 Sobic008G181900--Sobic004G222400 Sobic008G181900--Sobic003G329600 Sobic008G181900--Sobic003G255400 Sobic008G181900--Sobic010G176400 Sobic001G539600--Sobic003G255400 Sobic001G539600--Sobic003G329600 Sobic001G539600--Sobic010G141001 Sobic001G539600--Sobic010G176400 Sobic010G089900 Sobic010G089900 Sobic001G539600--Sobic010G089900 Sobic002G273200 Sobic002G273200 Sobic001G539600--Sobic002G273200 Sobic001G539600--Sobic004G222400 Sobic001G539940 Sobic001G539940 Sobic001G539600--Sobic001G539940 Sobic001G539600--Sobic008G099000 Sobic004G222400--Sobic010G141001 Sobic004G222400--Sobic008G099000 Sobic004G222400--Sobic003G329600 Sobic004G222400--Sobic010G176400 Sobic004G222400--Sobic003G255400 Sobic004G222400--Sobic001G539600 Sobic009G091000 Sobic009G091000 Sobic004G222400--Sobic009G091000 Sobic007G221932 Sobic007G221932 Sobic004G222400--Sobic007G221932 Sobic001G351600 Sobic001G351600 Sobic004G222400--Sobic001G351600 Sobic010G141001--Sobic004G222400 Sobic010G141001--Sobic003G255400 Sobic010G141001--Sobic003G329600 Sobic010G141001--Sobic001G539600 Sobic010G141001--Sobic008G099000 Sobic010G141001--Sobic010G176400 Sobic010G141001--Sobic002G273200 Sobic010G141001--Sobic010G089900 Sobic010G141001--Sobic009G091000 Sobic003G255400--Sobic001G539600 Sobic003G255400--Sobic010G141001 Sobic003G255400--Sobic003G329600 Sobic003G255400--Sobic010G176400 Sobic003G255400--Sobic004G222400 Sobic003G255400--Sobic010G089900 Sobic003G255400--Sobic002G273200 Sobic003G255400--Sobic008G099000 Sobic003G255400--Sobic001G539940 Sobic004G080000 Sobic004G080000 Sobic010G276200--Sobic004G080000 Sobic004G041800 Sobic004G041800 Sobic010G276200--Sobic004G041800 Sobic007G146300 Sobic007G146300 Sobic010G276200--Sobic007G146300 Sobic005G023600 Sobic005G023600 Sobic010G276200--Sobic005G023600 Sobic001G466100 Sobic001G466100 Sobic010G276200--Sobic001G466100 Sobic010G276200--Sobic010G176400 Sobic006G105500 Sobic006G105500 Sobic010G276200--Sobic006G105500 Sobic001G024250 Sobic001G024250 Sobic010G276200--Sobic001G024250 Sobic010G276200--Sobic010G089900 Sobic003G329600--Sobic010G176400 Sobic003G329600--Sobic003G255400 Sobic003G329600--Sobic010G141001 Sobic003G329600--Sobic001G539600 Sobic003G329600--Sobic004G222400 Sobic003G329600--Sobic010G089900 Sobic003G329600--Sobic008G099000 Sobic003G329600--Sobic002G273200 Sobic003G329600--Sobic001G466100 Sobic010G176400--Sobic003G329600 Sobic010G176400--Sobic010G141001 Sobic010G176400--Sobic003G255400 Sobic010G176400--Sobic004G222400 Sobic010G176400--Sobic001G539600 Sobic010G176400--Sobic008G099000 Sobic010G176400--Sobic010G089900 Sobic010G176400--Sobic001G466100 Sobic010G176400--Sobic002G273200
Octagon: transcription factors


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