Gene annotation
Transcriptome id Sobic.004G336800.2,Sobic.004G336800.1
Synonym
Functional annotation chloroplast unusual positioning protein, putative, expressed
UniProt A0A1Z5RQR8 , A0A194YT07
Pfam -
Panther DB PTHR31342 PTHR31342:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G04980 : -
RAP-DB (Rice) LOC_Os01g46340.1 : chloroplast unusual positioning protein, putative, expressed
MaizeGDB (Corn) Zm00025a032881
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G024250 - -
2 Sobic.006G096700 extracellular ligand-gated ion channel, putative, expressed -
3 Sobic.004G008500 - -
4 Sobic.001G445400 expressed protein -
5 Sobic.007G166500 expansin precursor, putative, expressed -
6 Sobic.002G029000 protein kinase, putative, expressed -
7 Sobic.010G276200 MLO domain containing protein, putative, expressed K08472: mlo protein
8 Sobic.007G146300 pectinesterase, putative, expressed -
9 Sobic.010G063700 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
10 Sobic.001G152800 pollen preferential protein, putative, expressed -
11 Sobic.004G080000 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
12 Sobic.010G016100 TKL_IRAK_CrRLK1L-1.13 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
13 Sobic.003G434100 - -
14 Sobic.005G023600 pollen allergen Cyn d 23, putative, expressed -
15 Sobic.004G041800 expressed protein -
16 Sobic.003G061600 RALFL11 - Rapid ALkalinization Factor RALF family protein precursor, putative -
17 Sobic.006G193700 DUF581 domain containing protein, expressed -
18 Sobic.006G105500 pectinesterase, putative, expressed -
19 Sobic.005G209300 GRAS family transcription factor domain containing protein, expressed -
20 Sobic.002G237100 - -


Gene co-expression network
sample Sobic004G336800 Sobic004G336800 Sobic001G024250 Sobic001G024250 Sobic004G336800--Sobic001G024250 Sobic006G096700 Sobic006G096700 Sobic004G336800--Sobic006G096700 Sobic004G008500 Sobic004G008500 Sobic004G336800--Sobic004G008500 Sobic001G445400 Sobic001G445400 Sobic004G336800--Sobic001G445400 Sobic007G166500 Sobic007G166500 Sobic004G336800--Sobic007G166500 Sobic002G029000 Sobic002G029000 Sobic004G336800--Sobic002G029000 Sobic010G276200 Sobic010G276200 Sobic004G336800--Sobic010G276200 Sobic007G146300 Sobic007G146300 Sobic004G336800--Sobic007G146300 Sobic010G063700 Sobic010G063700 Sobic004G336800--Sobic010G063700 Sobic001G024250--Sobic007G146300 Sobic004G080000 Sobic004G080000 Sobic001G024250--Sobic004G080000 Sobic001G024250--Sobic010G276200 Sobic004G041800 Sobic004G041800 Sobic001G024250--Sobic004G041800 Sobic005G209300 Sobic005G209300 Sobic001G024250--Sobic005G209300 Sobic005G023600 Sobic005G023600 Sobic001G024250--Sobic005G023600 Sobic001G024250--Sobic002G029000 Sobic001G466100 Sobic001G466100 Sobic001G024250--Sobic001G466100 Sobic001G024250--Sobic006G096700 Sobic006G096700--Sobic005G023600 Sobic006G096700--Sobic010G276200 Sobic006G096700--Sobic004G080000 Sobic006G105500 Sobic006G105500 Sobic006G096700--Sobic006G105500 Sobic006G096700--Sobic007G146300 Sobic004G359900 Sobic004G359900 Sobic006G096700--Sobic004G359900 Sobic006G193700 Sobic006G193700 Sobic006G096700--Sobic006G193700 Sobic006G096700--Sobic004G041800 Sobic010G151575 Sobic010G151575 Sobic006G096700--Sobic010G151575 Sobic004G008500--Sobic010G063700 Sobic001G152800 Sobic001G152800 Sobic004G008500--Sobic001G152800 Sobic004G008500--Sobic001G445400 Sobic010G016100 Sobic010G016100 Sobic004G008500--Sobic010G016100 Sobic008G138100 Sobic008G138100 Sobic004G008500--Sobic008G138100 Sobic004G008500--Sobic007G166500 Sobic010G279600 Sobic010G279600 Sobic004G008500--Sobic010G279600 Sobic010G140700 Sobic010G140700 Sobic004G008500--Sobic010G140700 Sobic004G008500--Sobic002G029000 Sobic001G445400--Sobic010G063700 Sobic001G445400--Sobic010G016100 Sobic001G445400--Sobic001G152800 Sobic001G445400--Sobic008G138100 Sobic002G237100 Sobic002G237100 Sobic001G445400--Sobic002G237100 Sobic001G445400--Sobic007G166500 Sobic001G445400--Sobic005G023600 Sobic001G445400--Sobic010G140700 Sobic001G445400--Sobic007G146300 Sobic007G166500--Sobic002G029000 Sobic003G434100 Sobic003G434100 Sobic007G166500--Sobic003G434100 Sobic007G166500--Sobic001G445400 Sobic007G166500--Sobic001G152800 Sobic007G166500--Sobic007G146300 Sobic002G323200 Sobic002G323200 Sobic007G166500--Sobic002G323200 Sobic007G166500--Sobic001G024250 Sobic007G166500--Sobic004G080000 Sobic007G166500--Sobic005G209300 Sobic002G029000--Sobic007G166500 Sobic002G029000--Sobic003G434100 Sobic002G029000--Sobic002G323200 Sobic002G029000--Sobic007G146300 Sobic002G029000--Sobic001G024250 Sobic002G029000--Sobic005G209300 Sobic002G029000--Sobic004G080000 Sobic002G029000--Sobic004G041800 Sobic009G072600 Sobic009G072600 Sobic002G029000--Sobic009G072600 Sobic010G276200--Sobic004G080000 Sobic010G276200--Sobic004G041800 Sobic010G276200--Sobic007G146300 Sobic010G276200--Sobic005G023600 Sobic010G276200--Sobic001G466100 Sobic010G176400 Sobic010G176400 Sobic010G276200--Sobic010G176400 Sobic010G276200--Sobic006G105500 Sobic010G276200--Sobic001G024250 Sobic010G089900 Sobic010G089900 Sobic010G276200--Sobic010G089900 Sobic007G146300--Sobic004G080000 Sobic007G146300--Sobic004G041800 Sobic007G146300--Sobic010G276200 Sobic007G146300--Sobic005G023600 Sobic007G146300--Sobic005G209300 Sobic007G146300--Sobic001G466100 Sobic007G146300--Sobic001G024250 Sobic007G146300--Sobic010G176400 Sobic007G146300--Sobic006G105500 Sobic010G063700--Sobic010G016100 Sobic010G063700--Sobic001G445400 Sobic010G063700--Sobic008G138100 Sobic010G063700--Sobic010G140700 Sobic010G063700--Sobic002G237100 Sobic010G063700--Sobic006G193700 Sobic005G212900 Sobic005G212900 Sobic010G063700--Sobic005G212900 Sobic010G063700--Sobic005G023600 Sobic010G063700--Sobic001G152800
Octagon: transcription factors


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