Gene annotation
Transcriptome id Sobic.006G000800.1
Synonym Sb06g000240, XLG3
Functional annotation expressed protein
UniProt C5YB75
Pfam -
Panther DB PTHR36486 PTHR36486:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G31930 : extra-large GTP-binding protein 3
RAP-DB (Rice) LOC_Os01g74620.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G090100 - -
2 Sobic.002G090100 - -
3 Sobic.002G090100 - -
4 Sobic.002G090100 - -
5 Sobic.002G090100 - -
6 Sobic.002G090100 - -
7 Sobic.005G171001 - -
8 Sobic.001G381400 expressed protein -
9 Sobic.007G159100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@tetraspanin family protein, putative, expressed -
10 Sobic.002G225700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
11 Sobic.004G295600 AP2 domain containing protein, expressed -
12 Sobic.002G102132 - -
13 Sobic.004G263100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
14 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
15 Sobic.005G132066 - -
16 Sobic.010G104300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
17 Sobic.008G079500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.002G390000 dirigent, putative, expressed -
19 Sobic.004G094900 expressed protein -
20 Sobic.006G163401 - -


Gene co-expression network
sample Sobic006G000800 Sobic006G000800 Sobic002G090100 Sobic002G090100 Sobic006G000800--Sobic002G090100 Sobic005G171001 Sobic005G171001 Sobic006G000800--Sobic005G171001 Sobic001G381400 Sobic001G381400 Sobic006G000800--Sobic001G381400 Sobic007G159100 Sobic007G159100 Sobic006G000800--Sobic007G159100 Sobic002G090100--Sobic002G090100 Sobic002G090100--Sobic001G381400 Sobic002G090100--Sobic007G159100 Sobic002G102132 Sobic002G102132 Sobic002G090100--Sobic002G102132 Sobic004G263100 Sobic004G263100 Sobic002G090100--Sobic004G263100 Sobic002G388800 Sobic002G388800 Sobic005G171001--Sobic002G388800 Sobic005G171001--Sobic001G381400 Sobic005G171001--Sobic002G090100 Sobic004G094900 Sobic004G094900 Sobic005G171001--Sobic004G094900 Sobic001G381400--Sobic002G090100 Sobic001G381400--Sobic004G094900 Sobic002G390000 Sobic002G390000 Sobic001G381400--Sobic002G390000 Sobic001G381400--Sobic007G159100 Sobic007G159100--Sobic002G102132 Sobic007G159100--Sobic004G263100 Sobic007G159100--Sobic002G090100 Sobic007G159100--Sobic001G381400
Octagon: transcription factors


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