Gene annotation
| Transcriptome id | Sobic.006G033001.1 |
|---|---|
| Synonym | - |
| Functional annotation | - |
| UniProt | A0A1Z5RCP9 |
| Pfam | PF00098 |
| Panther DB | PTHR23002 PTHR23002:SF63 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0008270; zinc ion binding GO:0003676nucleic acid binding |
Orthologs (automatic annotation)
| TAIR | - |
|---|---|
| RAP-DB (Rice) | LOC_Os04g45890.1 : retrotransposon protein, putative, unclassified, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G048300 | expressed protein | - |
| 2 | Sobic.002G048300 | expressed protein | - |
| 3 | Sobic.002G048300 | expressed protein | - |
| 4 | Sobic.002G048300 | expressed protein | - |
| 5 | Sobic.002G048300 | expressed protein | - |
| 6 | Sobic.002G048300 | expressed protein | - |
| 7 | Sobic.002G048300 | expressed protein | - |
| 8 | Sobic.005G117901 | - | - |
| 9 | Sobic.003G302701 | - | - |
| 10 | Sobic.008G101350 | - | - |
| 11 | Sobic.004G096200 | - | - |
| 12 | Sobic.008G114401 | - | - |
| 13 | Sobic.005G130450 | - | - |
| 14 | Sobic.001G243901 | - | - |
| 15 | Sobic.004G279300 | photoperiodic flowering time gene(PubMedID : 22394582)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed | - |
| 16 | Sobic.001G271801 | - | - |
| 17 | Sobic.010G161100 | - | - |
| 18 | Sobic.003G351150 | - | - |
| 19 | Sobic.003G121900 | - | - |
| 20 | Sobic.001G287301 | - | - |
Gene co-expression network
Octagon: transcription factors
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