Gene annotation
Transcriptome id Sobic.003G351150.1
Synonym -
Functional annotation -
UniProt A0A1W0W0D8
Pfam PF00071
Panther DB PTHR24073 PTHR24073:SF553
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007264; small GTPase mediated signal transduction GO:0005525GTP binding


Orthologs (automatic annotation)
TAIR AT1G16920 : RAB GTPase homolog A1B
RAP-DB (Rice) LOC_Os06g35814.1 : ras-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a039651 , Zm00025a046500 , Zm00025a036613 , Zm00025a044235 , Zm00025a008844 , Zm00025a037063 , Zm00025a043281 , Zm00025a016417 , Zm00025a028122 , Zm00025a042339 , Zm00025a008978 , Zm00025a051086 , Zm00025a044575 , Zm00025a013755 , Zm00025a038289
Brachypodium KQK10571 , KQK12398 , KQK06841 , KQK12397 , KQK09101 , PNT64397 , KQJ98137 , KQJ98073 , KQK12193 , KQK08122 , PNT73882 , KQK18040 , KQK10572 , KQK09739
Barley HORVU7Hr1G089120.1 , HORVU7Hr1G089120.2 , HORVU5Hr1G056470.1 , HORVU5Hr1G120210.2 , HORVU5Hr1G120210.1 , HORVU5Hr1G120210.4 , HORVU3Hr1G071740.6 , HORVU3Hr1G071740.4 , HORVU3Hr1G071740.1 , HORVU3Hr1G061000.1 , HORVU3Hr1G061000.3 , HORVU3Hr1G061000.4 , HORVU3Hr1G061000.5 , HORVU3Hr1G061000.6 , HORVU3Hr1G061000.7 , HORVU3Hr1G061000.8 , HORVU3Hr1G071740.2 , HORVU3Hr1G071740.3 , HORVU5Hr1G114250.1 , HORVU5Hr1G114250.2 , HORVU3Hr1G071740.5 , HORVU1Hr1G001920.3 , HORVU1Hr1G001920.2 , HORVU3Hr1G085710.4 , HORVU3Hr1G085710.2 , HORVU3Hr1G085710.1
Wheat TraesCS7B02G273300 , TraesCS5D02G498600 , TraesCS1A02G015400 , TraesCS3B02G272300 , TraesCS3B02G396200 , TraesCS5A02G184100 , TraesCS3A02G289600 , TraesCS5D02G188900 , TraesCS7D02G368300 , TraesCS3D02G357500 , TraesCS3B02G324300 , TraesCS5B02G182200 , TraesCS4A02G343500 , TraesCS1D02G405900 , TraesCS7B02G200600 , TraesCS5D02G529500 , TraesCS7A02G285200 , TraesCS1A02G398400 , TraesCS1B02G426300 , TraesCS1B02G018900 , TraesCS3D02G289400 , TraesCS7A02G354400 , TraesCS7D02G289000 , TraesCS3A02G364100 , TraesCS3A02G247000 , TraesCS1D02G013300 , TraesCS5B02G530800 , TraesCS5B02G498600 , TraesCS5A02G485100 , TraesCS3D02G244500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G101700 - -
2 Sobic.001G278600 - -
3 Sobic.001G055900 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
4 Sobic.004G230400 expressed protein -
5 Sobic.002G079801 - -
6 Sobic.003G285400 heat shock protein DnaJ, putative, expressed -
7 Sobic.001G184500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR55 - Auxin-responsive SAUR gene family member, expressed -
8 Sobic.003G266700 expressed protein -
9 Sobic.005G096800 - -
10 Sobic.005G060633 - -
11 Sobic.004G132150 - -
12 Sobic.008G025900 expressed protein -
13 Sobic.005G139800 Brix domain containing protein, putative, expressed -
14 Sobic.002G224450 - -
15 Sobic.004G317600 pathogenesis-related Bet v I family protein, putative, expressed -
16 Sobic.008G052500 receptor-like kinase, putative, expressed -
17 Sobic.004G120200 expressed protein -
18 Sobic.003G121900 - -
19 Sobic.009G157500 MYB family transcription factor, putative, expressed -
20 Sobic.007G144200 - -


Gene co-expression network
sample Sobic003G351150 Sobic003G351150 Sobic010G101700 Sobic010G101700 Sobic003G351150--Sobic010G101700 Sobic001G278600 Sobic001G278600 Sobic003G351150--Sobic001G278600 Sobic001G055900 Sobic001G055900 Sobic003G351150--Sobic001G055900 Sobic004G230400 Sobic004G230400 Sobic003G351150--Sobic004G230400 Sobic002G079801 Sobic002G079801 Sobic003G351150--Sobic002G079801 Sobic003G285400 Sobic003G285400 Sobic003G351150--Sobic003G285400 Sobic001G184500 Sobic001G184500 Sobic003G351150--Sobic001G184500 Sobic003G266700 Sobic003G266700 Sobic003G351150--Sobic003G266700 Sobic005G096800 Sobic005G096800 Sobic003G351150--Sobic005G096800 Sobic010G101700--Sobic001G184500 Sobic010G101700--Sobic001G278600 Sobic010G101700--Sobic003G351150 Sobic009G157500 Sobic009G157500 Sobic010G101700--Sobic009G157500 Sobic010G101700--Sobic003G266700 Sobic008G065400 Sobic008G065400 Sobic010G101700--Sobic008G065400 Sobic010G101700--Sobic002G079801 Sobic002G224450 Sobic002G224450 Sobic010G101700--Sobic002G224450 Sobic007G005000 Sobic007G005000 Sobic010G101700--Sobic007G005000 Sobic001G278600--Sobic008G065400 Sobic001G278600--Sobic010G101700 Sobic001G278600--Sobic003G266700 Sobic003G374500 Sobic003G374500 Sobic001G278600--Sobic003G374500 Sobic003G366850 Sobic003G366850 Sobic001G278600--Sobic003G366850 Sobic009G159300 Sobic009G159300 Sobic001G278600--Sobic009G159300 Sobic004G121000 Sobic004G121000 Sobic001G278600--Sobic004G121000 Sobic001G278600--Sobic003G351150 Sobic002G171400 Sobic002G171400 Sobic001G278600--Sobic002G171400 Sobic001G055900--Sobic009G157500 Sobic001G055900--Sobic003G351150 Sobic001G055900--Sobic005G096800 Sobic001G055900--Sobic010G101700 Sobic001G055900--Sobic002G224450 Sobic003G119800 Sobic003G119800 Sobic001G055900--Sobic003G119800 Sobic008G025900 Sobic008G025900 Sobic001G055900--Sobic008G025900 Sobic007G144200 Sobic007G144200 Sobic001G055900--Sobic007G144200 Sobic003G026300 Sobic003G026300 Sobic001G055900--Sobic003G026300 Sobic004G230400--Sobic003G351150 Sobic005G139800 Sobic005G139800 Sobic004G230400--Sobic005G139800 Sobic004G230400--Sobic010G101700 Sobic008G015700 Sobic008G015700 Sobic004G230400--Sobic008G015700 Sobic004G230400--Sobic001G278600 Sobic004G132150 Sobic004G132150 Sobic004G230400--Sobic004G132150 Sobic008G049701 Sobic008G049701 Sobic004G230400--Sobic008G049701 Sobic004G230400--Sobic009G157500 Sobic001G271801 Sobic001G271801 Sobic004G230400--Sobic001G271801 Sobic003G079800 Sobic003G079800 Sobic002G079801--Sobic003G079800 Sobic008G044750 Sobic008G044750 Sobic002G079801--Sobic008G044750 Sobic002G079801--Sobic001G184500 Sobic003G198150 Sobic003G198150 Sobic002G079801--Sobic003G198150 Sobic009G183000 Sobic009G183000 Sobic002G079801--Sobic009G183000 Sobic001G140200 Sobic001G140200 Sobic002G079801--Sobic001G140200 Sobic009G128300 Sobic009G128300 Sobic002G079801--Sobic009G128300 Sobic002G079801--Sobic010G101700 Sobic001G509400 Sobic001G509400 Sobic002G079801--Sobic001G509400 Sobic004G317600 Sobic004G317600 Sobic003G285400--Sobic004G317600 Sobic003G285400--Sobic008G025900 Sobic003G285400--Sobic003G026300 Sobic003G285400--Sobic003G351150 Sobic010G046500 Sobic010G046500 Sobic003G285400--Sobic010G046500 Sobic010G100366 Sobic010G100366 Sobic003G285400--Sobic010G100366 Sobic003G285400--Sobic005G139800 Sobic005G167300 Sobic005G167300 Sobic003G285400--Sobic005G167300 Sobic006G218700 Sobic006G218700 Sobic003G285400--Sobic006G218700 Sobic001G184500--Sobic010G101700 Sobic001G184500--Sobic002G079801 Sobic003G015100 Sobic003G015100 Sobic001G184500--Sobic003G015100 Sobic008G052500 Sobic008G052500 Sobic001G184500--Sobic008G052500 Sobic001G184500--Sobic008G065400 Sobic001G184500--Sobic001G278600 Sobic001G184500--Sobic007G005000 Sobic001G184500--Sobic003G266700 Sobic001G184500--Sobic002G171400 Sobic003G266700--Sobic008G065400 Sobic003G266700--Sobic001G278600 Sobic003G266700--Sobic004G121000 Sobic003G311200 Sobic003G311200 Sobic003G266700--Sobic003G311200 Sobic003G266700--Sobic003G366850 Sobic003G429500 Sobic003G429500 Sobic003G266700--Sobic003G429500 Sobic008G045600 Sobic008G045600 Sobic003G266700--Sobic008G045600 Sobic003G266700--Sobic010G101700 Sobic003G266700--Sobic004G317600 Sobic002G166600 Sobic002G166600 Sobic005G096800--Sobic002G166600 Sobic002G400900 Sobic002G400900 Sobic005G096800--Sobic002G400900 Sobic005G110427 Sobic005G110427 Sobic005G096800--Sobic005G110427 Sobic001G022100 Sobic001G022100 Sobic005G096800--Sobic001G022100 Sobic005G096800--Sobic005G139800 Sobic005G096800--Sobic007G144200 Sobic005G096800--Sobic001G055900 Sobic004G132100 Sobic004G132100 Sobic005G096800--Sobic004G132100 Sobic005G096800--Sobic001G271801
Octagon: transcription factors


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