Gene annotation
Transcriptome id Sobic.006G077900.1
Synonym OASA1, ATCYS-3A, CYTACS1, Sb06g016480, OLD3
Functional annotation cysteine synthase, putative, expressed
UniProt A0A1B6PKV9
Pfam PF00291
Panther DB PTHR10314 PTHR10314:SF108
NCBI CDD KOG1252; Cystathionine beta-synthase and related enzymes
KEGG Orthology K01738; cysteine synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14880 : O-acetylserine (thiol) lyase (OAS-TL) isoform A1
RAP-DB (Rice) LOC_Os03g53650.3 : cysteine synthase, putative, expressed
MaizeGDB (Corn) Zm00025a012349
Brachypodium KQJ85706 , KQJ85707 , KQJ85705
Barley HORVU5Hr1G005980.5 , HORVU5Hr1G005980.4 , HORVU5Hr1G005980.7 , HORVU5Hr1G005980.6 , HORVU5Hr1G005980.1 , HORVU5Hr1G005980.3 , HORVU5Hr1G005980.2
Wheat TraesCS5A02G022200 , TraesCS5B02G018700 , TraesCS5B02G018700 , TraesCS5B02G018700 , TraesCS5B02G018700 , TraesCS5D02G027600 , TraesCS5D02G027600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G267651 - -
2 Sobic.002G188800 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
3 Sobic.002G401301 - -
4 Sobic.002G277366 - -
5 Sobic.004G181100 expressed protein -
6 Sobic.004G274000 STE_MEK_ste7_MAP2K.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.003G066250 - -
8 Sobic.007G120600 KED, putative, expressed -
9 Sobic.006G042800 expressed protein -
10 Sobic.008G096401 - -
11 Sobic.004G052700 hypothetical protein -
12 Sobic.003G023100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@- -
13 Sobic.002G159400 expressed protein -
14 Sobic.003G021401 - -
15 Sobic.001G060001 - -
16 Sobic.006G088500 OsFBX135 - F-box domain containing protein, expressed -
17 Sobic.007G035100 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
18 Sobic.006G077100 serine/threonine-protein kinase receptor precursor, putative, expressed -
19 Sobic.003G120050 - -
20 Sobic.002G063201 - -


Gene co-expression network
sample Sobic006G077900 Sobic006G077900 Sobic010G267651 Sobic010G267651 Sobic006G077900--Sobic010G267651 Sobic002G188800 Sobic002G188800 Sobic006G077900--Sobic002G188800 Sobic002G401301 Sobic002G401301 Sobic006G077900--Sobic002G401301 Sobic002G277366 Sobic002G277366 Sobic006G077900--Sobic002G277366 Sobic004G181100 Sobic004G181100 Sobic006G077900--Sobic004G181100 Sobic004G274000 Sobic004G274000 Sobic006G077900--Sobic004G274000 Sobic003G066250 Sobic003G066250 Sobic006G077900--Sobic003G066250 Sobic007G120600 Sobic007G120600 Sobic006G077900--Sobic007G120600 Sobic006G042800 Sobic006G042800 Sobic006G077900--Sobic006G042800 Sobic010G267651--Sobic002G188800 Sobic010G267651--Sobic007G120600 Sobic008G096401 Sobic008G096401 Sobic010G267651--Sobic008G096401 Sobic004G052700 Sobic004G052700 Sobic010G267651--Sobic004G052700 Sobic010G267651--Sobic004G181100 Sobic001G060001 Sobic001G060001 Sobic010G267651--Sobic001G060001 Sobic010G267651--Sobic006G042800 Sobic010G267651--Sobic006G077900 Sobic002G159400 Sobic002G159400 Sobic010G267651--Sobic002G159400 Sobic002G188800--Sobic004G181100 Sobic002G188800--Sobic010G267651 Sobic002G188800--Sobic006G042800 Sobic002G188800--Sobic002G159400 Sobic002G188800--Sobic008G096401 Sobic002G188800--Sobic004G052700 Sobic002G188800--Sobic004G274000 Sobic002G188800--Sobic007G120600 Sobic002G188800--Sobic002G401301 Sobic002G401301--Sobic004G274000 Sobic002G401301--Sobic002G188800 Sobic002G401301--Sobic004G181100 Sobic002G401301--Sobic010G267651 Sobic002G401301--Sobic006G042800 Sobic002G401301--Sobic002G159400 Sobic002G401301--Sobic008G096401 Sobic002G401301--Sobic004G052700 Sobic007G035100 Sobic007G035100 Sobic002G401301--Sobic007G035100 Sobic003G021401 Sobic003G021401 Sobic002G277366--Sobic003G021401 Sobic003G023100 Sobic003G023100 Sobic002G277366--Sobic003G023100 Sobic003G120050 Sobic003G120050 Sobic002G277366--Sobic003G120050 Sobic003G323750 Sobic003G323750 Sobic002G277366--Sobic003G323750 Sobic002G063201 Sobic002G063201 Sobic002G277366--Sobic002G063201 Sobic010G091750 Sobic010G091750 Sobic002G277366--Sobic010G091750 Sobic002G277366--Sobic006G077900 Sobic001G452300 Sobic001G452300 Sobic002G277366--Sobic001G452300 Sobic007G087500 Sobic007G087500 Sobic002G277366--Sobic007G087500 Sobic004G181100--Sobic006G042800 Sobic004G181100--Sobic002G188800 Sobic004G181100--Sobic002G159400 Sobic004G181100--Sobic008G096401 Sobic004G181100--Sobic004G052700 Sobic004G181100--Sobic007G120600 Sobic004G181100--Sobic010G267651 Sobic004G181100--Sobic004G274000 Sobic004G181100--Sobic001G060001 Sobic004G274000--Sobic002G401301 Sobic004G274000--Sobic007G035100 Sobic010G111700 Sobic010G111700 Sobic004G274000--Sobic010G111700 Sobic004G274000--Sobic004G181100 Sobic004G274000--Sobic002G188800 Sobic004G274000--Sobic006G042800 Sobic004G274000--Sobic002G159400 Sobic004G274000--Sobic010G267651 Sobic007G069450 Sobic007G069450 Sobic004G274000--Sobic007G069450 Sobic003G066250--Sobic010G267651 Sobic003G066250--Sobic007G120600 Sobic003G066250--Sobic004G052700 Sobic003G066250--Sobic008G096401 Sobic003G066250--Sobic001G060001 Sobic003G066250--Sobic002G188800 Sobic003G066250--Sobic003G023100 Sobic003G066250--Sobic006G077900 Sobic010G146350 Sobic010G146350 Sobic003G066250--Sobic010G146350 Sobic007G120600--Sobic004G052700 Sobic007G120600--Sobic008G096401 Sobic007G120600--Sobic001G060001 Sobic007G120600--Sobic010G146350 Sobic005G207600 Sobic005G207600 Sobic007G120600--Sobic005G207600 Sobic007G120600--Sobic010G267651 Sobic007G120600--Sobic004G181100 Sobic010G228200 Sobic010G228200 Sobic007G120600--Sobic010G228200 Sobic007G120600--Sobic002G188800 Sobic006G042800--Sobic002G159400 Sobic006G042800--Sobic004G181100 Sobic006G042800--Sobic002G188800 Sobic006G042800--Sobic008G096401 Sobic006G042800--Sobic004G052700 Sobic006G042800--Sobic007G120600 Sobic006G042800--Sobic010G267651 Sobic006G042800--Sobic004G274000 Sobic006G042800--Sobic001G060001
Octagon: transcription factors


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