Gene annotation
Transcriptome id Sobic.007G067616.1
Synonym -
Functional annotation -
UniProt A0A1Z5R992
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G39110 : RmlC-like cupins superfamily protein
RAP-DB (Rice) LOC_Os12g05840.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029969 , Zm00025a054791 , Zm00025a054792 , Zm00025a029970 , Zm00025a029971 , Zm00025a029972 , Zm00025a029973 , Zm00025a029974 , Zm00025a029975
Brachypodium -
Barley -
Wheat TraesCS3D02G011000 , TraesCS3A02G012400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G238600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
2 Sobic.002G090100 - -
3 Sobic.002G090100 - -
4 Sobic.002G090100 - -
5 Sobic.002G090100 - -
6 Sobic.002G090100 - -
7 Sobic.002G090100 - -
8 Sobic.002G390000 dirigent, putative, expressed -
9 Sobic.001G381400 expressed protein -
10 Sobic.001G249266 - -
11 Sobic.007G159100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@tetraspanin family protein, putative, expressed -
12 Sobic.002G102132 - -
13 Sobic.001G327500 uridine 5-monophosphate synthase, putative, expressed K13421: uridine monophosphate synthetase
14 Sobic.008G079500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.004G263100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
16 Sobic.006G104700 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
17 Sobic.003G112400 expressed protein -
18 Sobic.004G094900 expressed protein -
19 Sobic.005G171001 - -
20 Sobic.001G102150 - -


Gene co-expression network
sample Sobic007G067616 Sobic007G067616 Sobic002G238600 Sobic002G238600 Sobic007G067616--Sobic002G238600 Sobic002G090100 Sobic002G090100 Sobic007G067616--Sobic002G090100 Sobic002G390000 Sobic002G390000 Sobic007G067616--Sobic002G390000 Sobic001G381400 Sobic001G381400 Sobic007G067616--Sobic001G381400 Sobic002G238600--Sobic002G390000 Sobic002G238600--Sobic001G381400 Sobic005G180500 Sobic005G180500 Sobic002G238600--Sobic005G180500 Sobic006G104700 Sobic006G104700 Sobic002G238600--Sobic006G104700 Sobic002G388800 Sobic002G388800 Sobic002G238600--Sobic002G388800 Sobic001G065900 Sobic001G065900 Sobic002G238600--Sobic001G065900 Sobic004G263100 Sobic004G263100 Sobic002G238600--Sobic004G263100 Sobic003G060100 Sobic003G060100 Sobic002G238600--Sobic003G060100 Sobic004G094900 Sobic004G094900 Sobic002G238600--Sobic004G094900 Sobic002G090100--Sobic002G090100 Sobic002G090100--Sobic001G381400 Sobic007G159100 Sobic007G159100 Sobic002G090100--Sobic007G159100 Sobic002G102132 Sobic002G102132 Sobic002G090100--Sobic002G102132 Sobic002G090100--Sobic004G263100 Sobic002G390000--Sobic002G238600 Sobic002G390000--Sobic001G381400 Sobic002G390000--Sobic004G094900 Sobic002G390000--Sobic002G090100 Sobic001G381400--Sobic002G090100 Sobic001G381400--Sobic004G094900 Sobic001G381400--Sobic002G390000 Sobic001G381400--Sobic007G159100
Octagon: transcription factors


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