Gene annotation
Transcriptome id Sobic.007G082900.1
Synonym
Functional annotation -
UniProt A0A1B6PGF2
Pfam PF02671
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT1G24230 : Paired amphipathic helix (PAH2) superfamily protein
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G082900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G219300 DEFL27 - Defensin and Defensin-like DEFL family -
2 Sobic.005G187100 - -
3 Sobic.004G196200 cytochrome P450, putative, expressed K12639: CYP724B1, cytochrome P450 family 724 subfamily B polypeptide 1
4 Sobic.010G034900 expressed protein -
5 Sobic.003G024700 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.005G153600 DEF1 - Defensin and Defensin-like DEFL family, expressed -
7 Sobic.005G225000 - -
8 Sobic.005G199101 - K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
9 Sobic.010G153800 - -
10 Sobic.008G013100 expressed protein -
11 Sobic.008G064000 LTPL36 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.005G074800 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.010G148600 WRKY31, expressed -
14 Sobic.005G153400 - -
15 Sobic.003G323000 - -
16 Sobic.005G148600 - -
17 Sobic.003G350900 homeobox domain containing protein, expressed -
18 Sobic.007G205200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.001G096500 phosphoesterase, putative, expressed K08073: bifunctional polynucleotide phosphatase/kinase
20 Sobic.006G059900 "ZmIPT2(Ortholog in maize:Weng et al., 2013)"(PubMedID : 31659896)@IPP transferase, putative, expressed K10760: adenylate dimethylallyltransferase (cytokinin synthase)


Gene co-expression network
sample Sobic007G082900 Sobic007G082900 Sobic010G219300 Sobic010G219300 Sobic007G082900--Sobic010G219300 Sobic005G187100 Sobic005G187100 Sobic007G082900--Sobic005G187100 Sobic004G196200 Sobic004G196200 Sobic007G082900--Sobic004G196200 Sobic010G034900 Sobic010G034900 Sobic007G082900--Sobic010G034900 Sobic003G024700 Sobic003G024700 Sobic007G082900--Sobic003G024700 Sobic005G153600 Sobic005G153600 Sobic007G082900--Sobic005G153600 Sobic005G225000 Sobic005G225000 Sobic007G082900--Sobic005G225000 Sobic005G199101 Sobic005G199101 Sobic007G082900--Sobic005G199101 Sobic010G153800 Sobic010G153800 Sobic007G082900--Sobic010G153800 Sobic010G219300--Sobic003G024700 Sobic010G219300--Sobic005G187100 Sobic010G219300--Sobic010G034900 Sobic010G219300--Sobic007G082900 Sobic010G219300--Sobic005G153600 Sobic010G219300--Sobic005G225000 Sobic010G148600 Sobic010G148600 Sobic010G219300--Sobic010G148600 Sobic001G096500 Sobic001G096500 Sobic010G219300--Sobic001G096500 Sobic010G219300--Sobic005G199101 Sobic005G187100--Sobic010G153800 Sobic005G187100--Sobic005G199101 Sobic005G187100--Sobic005G225000 Sobic005G187100--Sobic010G219300 Sobic005G187100--Sobic007G082900 Sobic002G091800 Sobic002G091800 Sobic005G187100--Sobic002G091800 Sobic002G344900 Sobic002G344900 Sobic005G187100--Sobic002G344900 Sobic005G187100--Sobic005G153600 Sobic005G187100--Sobic010G148600 Sobic005G148600 Sobic005G148600 Sobic004G196200--Sobic005G148600 Sobic005G074800 Sobic005G074800 Sobic004G196200--Sobic005G074800 Sobic004G196200--Sobic007G082900 Sobic004G196200--Sobic010G219300 Sobic009G039900 Sobic009G039900 Sobic004G196200--Sobic009G039900 Sobic005G090500 Sobic005G090500 Sobic004G196200--Sobic005G090500 Sobic005G153400 Sobic005G153400 Sobic004G196200--Sobic005G153400 Sobic004G196200--Sobic010G034900 Sobic005G074900 Sobic005G074900 Sobic004G196200--Sobic005G074900 Sobic008G064000 Sobic008G064000 Sobic010G034900--Sobic008G064000 Sobic010G034900--Sobic003G024700 Sobic001G249233 Sobic001G249233 Sobic010G034900--Sobic001G249233 Sobic010G034900--Sobic010G219300 Sobic005G174900 Sobic005G174900 Sobic010G034900--Sobic005G174900 Sobic006G062700 Sobic006G062700 Sobic010G034900--Sobic006G062700 Sobic010G034900--Sobic010G148600 Sobic010G109700 Sobic010G109700 Sobic010G034900--Sobic010G109700 Sobic007G083300 Sobic007G083300 Sobic010G034900--Sobic007G083300 Sobic003G024700--Sobic010G219300 Sobic003G024700--Sobic010G034900 Sobic003G024700--Sobic010G148600 Sobic003G024700--Sobic001G249233 Sobic003G024700--Sobic005G174900 Sobic003G024700--Sobic006G062700 Sobic005G140400 Sobic005G140400 Sobic003G024700--Sobic005G140400 Sobic003G024700--Sobic001G096500 Sobic003G024700--Sobic010G109700 Sobic005G153600--Sobic005G225000 Sobic007G205200 Sobic007G205200 Sobic005G153600--Sobic007G205200 Sobic005G153600--Sobic005G199101 Sobic005G153600--Sobic010G153800 Sobic005G153600--Sobic001G096500 Sobic005G153600--Sobic010G219300 Sobic005G153600--Sobic010G148600 Sobic005G116000 Sobic005G116000 Sobic005G153600--Sobic005G116000 Sobic005G153600--Sobic005G187100 Sobic005G225000--Sobic005G199101 Sobic005G225000--Sobic010G153800 Sobic005G225000--Sobic005G153600 Sobic005G225000--Sobic010G148600 Sobic005G225000--Sobic002G091800 Sobic005G225000--Sobic005G187100 Sobic005G225000--Sobic002G344900 Sobic005G225000--Sobic010G219300 Sobic005G225000--Sobic005G140400 Sobic005G199101--Sobic010G153800 Sobic005G199101--Sobic005G225000 Sobic005G199101--Sobic005G187100 Sobic005G199101--Sobic002G091800 Sobic005G199101--Sobic002G344900 Sobic005G199101--Sobic005G153600 Sobic005G199101--Sobic010G148600 Sobic005G199101--Sobic005G140400 Sobic005G199101--Sobic010G219300 Sobic010G153800--Sobic005G199101 Sobic010G153800--Sobic005G225000 Sobic010G153800--Sobic005G187100 Sobic010G153800--Sobic002G091800 Sobic010G153800--Sobic002G344900 Sobic010G153800--Sobic005G153600 Sobic010G153800--Sobic010G148600 Sobic010G153800--Sobic005G140400 Sobic010G153800--Sobic010G219300
Octagon: transcription factors


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