Gene annotation
Transcriptome id Sobic.007G205200.1
Synonym Sb07g027260, SbERF87, ethylene response factor 87
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5YIM3
Pfam PF00847
Panther DB PTHR31985 PTHR31985:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G31060 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os03g07830.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G096500 phosphoesterase, putative, expressed K08073: bifunctional polynucleotide phosphatase/kinase
2 Sobic.002G345400 DEF1 - Defensin and Defensin-like DEFL family, expressed -
3 Sobic.005G153600 DEF1 - Defensin and Defensin-like DEFL family, expressed -
4 Sobic.001G328900 expressed protein -
5 Sobic.005G102451 - -
6 Sobic.005G056100 - -
7 Sobic.010G109700 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
8 Sobic.005G116000 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.010G219300 DEFL27 - Defensin and Defensin-like DEFL family -
10 Sobic.005G153400 - -
11 Sobic.010G148600 WRKY31, expressed -
12 Sobic.003G024700 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.001G249233 - -
14 Sobic.005G051700 - -
15 Sobic.005G225000 - -
16 Sobic.003G303500 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
17 Sobic.009G039100 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
18 Sobic.010G034900 expressed protein -
19 Sobic.005G199101 - K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
20 Sobic.010G153800 - -


Gene co-expression network
sample Sobic007G205200 Sobic007G205200 Sobic001G096500 Sobic001G096500 Sobic007G205200--Sobic001G096500 Sobic002G345400 Sobic002G345400 Sobic007G205200--Sobic002G345400 Sobic005G153600 Sobic005G153600 Sobic007G205200--Sobic005G153600 Sobic001G328900 Sobic001G328900 Sobic007G205200--Sobic001G328900 Sobic005G102451 Sobic005G102451 Sobic007G205200--Sobic005G102451 Sobic005G056100 Sobic005G056100 Sobic007G205200--Sobic005G056100 Sobic010G109700 Sobic010G109700 Sobic007G205200--Sobic010G109700 Sobic005G116000 Sobic005G116000 Sobic007G205200--Sobic005G116000 Sobic010G219300 Sobic010G219300 Sobic007G205200--Sobic010G219300 Sobic001G096500--Sobic007G205200 Sobic001G096500--Sobic005G056100 Sobic001G096500--Sobic010G109700 Sobic001G096500--Sobic005G153600 Sobic001G096500--Sobic005G102451 Sobic001G096500--Sobic002G345400 Sobic001G249233 Sobic001G249233 Sobic001G096500--Sobic001G249233 Sobic010G148600 Sobic010G148600 Sobic001G096500--Sobic010G148600 Sobic001G096500--Sobic001G328900 Sobic002G345400--Sobic005G102451 Sobic002G345400--Sobic001G328900 Sobic002G345400--Sobic007G205200 Sobic002G345400--Sobic001G096500 Sobic009G039100 Sobic009G039100 Sobic002G345400--Sobic009G039100 Sobic003G303500 Sobic003G303500 Sobic002G345400--Sobic003G303500 Sobic002G345400--Sobic005G056100 Sobic002G345400--Sobic010G109700 Sobic005G153400 Sobic005G153400 Sobic002G345400--Sobic005G153400 Sobic005G225000 Sobic005G225000 Sobic005G153600--Sobic005G225000 Sobic005G153600--Sobic007G205200 Sobic005G199101 Sobic005G199101 Sobic005G153600--Sobic005G199101 Sobic010G153800 Sobic010G153800 Sobic005G153600--Sobic010G153800 Sobic005G153600--Sobic001G096500 Sobic005G153600--Sobic010G219300 Sobic005G153600--Sobic010G148600 Sobic005G153600--Sobic005G116000 Sobic005G187100 Sobic005G187100 Sobic005G153600--Sobic005G187100 Sobic001G328900--Sobic002G345400 Sobic001G328900--Sobic007G205200 Sobic001G328900--Sobic005G153400 Sobic001G328900--Sobic009G039100 Sobic001G328900--Sobic005G102451 Sobic001G328900--Sobic001G096500 Sobic005G051700 Sobic005G051700 Sobic001G328900--Sobic005G051700 Sobic001G328900--Sobic005G116000 Sobic006G064700 Sobic006G064700 Sobic001G328900--Sobic006G064700 Sobic005G102451--Sobic002G345400 Sobic005G102451--Sobic005G056100 Sobic005G102451--Sobic001G096500 Sobic005G102451--Sobic010G109700 Sobic005G102451--Sobic003G303500 Sobic005G102451--Sobic007G205200 Sobic008G081000 Sobic008G081000 Sobic005G102451--Sobic008G081000 Sobic005G102451--Sobic001G328900 Sobic005G102451--Sobic009G039100 Sobic005G056100--Sobic010G109700 Sobic005G056100--Sobic001G096500 Sobic005G056100--Sobic008G081000 Sobic005G056100--Sobic005G102451 Sobic005G056100--Sobic001G249233 Sobic005G056100--Sobic007G205200 Sobic006G062700 Sobic006G062700 Sobic005G056100--Sobic006G062700 Sobic005G056100--Sobic002G345400 Sobic008G088450 Sobic008G088450 Sobic005G056100--Sobic008G088450 Sobic010G109700--Sobic005G056100 Sobic010G109700--Sobic001G096500 Sobic010G109700--Sobic001G249233 Sobic010G109700--Sobic008G081000 Sobic010G109700--Sobic005G102451 Sobic010G109700--Sobic006G062700 Sobic005G174900 Sobic005G174900 Sobic010G109700--Sobic005G174900 Sobic007G025300 Sobic007G025300 Sobic010G109700--Sobic007G025300 Sobic010G109700--Sobic008G088450 Sobic005G116000--Sobic005G051700 Sobic005G116000--Sobic005G153400 Sobic005G116000--Sobic007G205200 Sobic009G040100 Sobic009G040100 Sobic005G116000--Sobic009G040100 Sobic005G116000--Sobic001G328900 Sobic005G116000--Sobic005G153600 Sobic010G195600 Sobic010G195600 Sobic005G116000--Sobic010G195600 Sobic005G116000--Sobic001G096500 Sobic005G116000--Sobic002G345400 Sobic003G024700 Sobic003G024700 Sobic010G219300--Sobic003G024700 Sobic010G219300--Sobic005G187100 Sobic010G034900 Sobic010G034900 Sobic010G219300--Sobic010G034900 Sobic007G082900 Sobic007G082900 Sobic010G219300--Sobic007G082900 Sobic010G219300--Sobic005G153600 Sobic010G219300--Sobic005G225000 Sobic010G219300--Sobic010G148600 Sobic010G219300--Sobic001G096500 Sobic010G219300--Sobic005G199101
Octagon: transcription factors


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